RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 C1orf186Q6ZWK4 172 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 MRPL10Q7Z7H8 261 aaKnown RBP25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 ZBTB8OSQ8IWT0 167 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 THNSL1Q8IYQ7 743 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 DEPTORQ8TB45 409 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 USP28Q96RU2 1077 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 LMAN2LQ9H0V9 348 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 CSRNP2Q9H175 543 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 RNF39Q9H2S5 420 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 NSUN3Q9H649 340 aaKnown RBP25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 AAASQ9NRG9 546 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 IPPQ9Y573 584 aa25.83■■□□□ 1.73
SMARCC2-204ENST00000547356 PLXNA4Q9HCM2 1894 aa25.83■■□□□ 1.72
SMARCC2-204ENST00000547356 HSP90AA1P07900 732 aaKnown RBP25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 MAPK7Q13164 816 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 KARSQ15046 597 aaKnown RBP25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 NAALADL2Q58DX5 795 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 NOMO2Q5JPE7 1267 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 KCNT2Q6UVM3 1135 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 GLB1LQ6UWU2 654 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 USP49Q70CQ1 688 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 KIFAP3Q92845 792 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 PGBD4Q96DM1 585 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 AK8Q96MA6 479 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 APOL6Q9BWW8 343 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 CCDC113Q9H0I3 377 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 FZD8Q9H461 694 aa25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 FBXO2Q9UK22 296 aaPredicted RBP25.82■■□□□ 1.72
SMARCC2-204ENST00000547356 NPHP3-ACAD11A0A0J9YXS1 232 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 B4GALT3O60512 393 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 NPTXRO95502 500 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 PLA2G4BP0C869 781 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 NCLP19338 710 aaKnown RBP25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 UBA7P41226 1012 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 PCBP1Q15365 356 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 PPP4R3CPQ6ZMV5 832 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 ATXN2LQ8WWM7 1075 aaKnown RBP25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 IFT74Q96LB3 600 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 ZNF558Q96NG5 402 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 CLIC6Q96NY7 704 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 NT5C3AQ9H0P0 336 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 NXF3Q9H4D5 531 aaKnown RBP25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 RSAD1Q9HA92 442 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 TBC1D13Q9NVG8 400 aa25.81■■□□□ 1.72
SMARCC2-204ENST00000547356 SFI1A8K8P3 1242 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 NT5C1B-RDH14C9J2C7 533 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 PRKCBP05771 671 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 GTF2F1P35269 517 aaKnown RBP eCLIP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 LONP1P36776 959 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 KCNQ1P51787 676 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 SLC12A3P55017 1021 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 PEX3P56589 373 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 NCBP1Q09161 790 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 PPP2R5AQ15172 486 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 ADGRD2Q7Z7M1 963 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 SYT2Q8N9I0 419 aaPredicted RBP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 HLA-CQ95604 372 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 CCDC51Q96ER9 411 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 ASB2Q96Q27 587 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 MRPL9Q9BYD2 267 aaKnown RBP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 GBP3Q9H0R5 595 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 C2orf40Q9H1Z8 148 aa25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 PRMT7Q9NVM4 692 aaPredicted RBP25.8■■□□□ 1.72
SMARCC2-204ENST00000547356 ZC3H11AO75152 810 aaKnown RBP eCLIP25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 ITGA4P13612 1032 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 PLCG1P19174 1290 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 BCAR1P56945 870 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 MRPS5P82675 430 aaKnown RBP25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 CACNB1Q02641 598 aaPredicted RBP25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 EPSTI1Q96J88 318 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 COL25A1Q9BXS0 654 aaPredicted RBP25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 ZSCAN16Q9H4T2 348 aaPredicted RBP25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 NRDE2Q9H7Z3 1164 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 BLOC1S4Q9NUP1 217 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 CNTNAP2Q9UHC6 1331 aa25.79■■□□□ 1.72
SMARCC2-204ENST00000547356 A0A1B0GUA9 196 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 CCDC169A6NNP5 214 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 NPTX2P47972 431 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 ERVFC1P60507 584 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 HYAL1Q12794 435 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 PKP1Q13835 747 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 DHX8Q14562 1220 aaKnown RBP25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 MAPK6Q16659 721 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 FAM187BQ17R55 369 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 EEF1DP3Q658K8 133 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 TMEM173Q86WV6 379 aaPredicted RBP25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 ZNF280BQ86YH2 543 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 CALML4Q96GE6 196 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 TRIM6Q9C030 488 aaPredicted RBP25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 PDZD7Q9H5P4 517 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 UBE2ZQ9H832 354 aaPredicted RBP25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 DNAJB4Q9UDY4 337 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 COG5Q9UP83 839 aa25.78■■□□□ 1.72
SMARCC2-204ENST00000547356 POMCP01189 267 aa25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 AKAP5P24588 427 aa25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 GUCY2CP25092 1073 aa25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 MLH1P40692 756 aa25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 RNASELQ05823 741 aaKnown RBP25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 PRPF4BQ13523 1007 aaKnown RBP25.77■■□□□ 1.72
SMARCC2-204ENST00000547356 TMEM132AQ24JP5 1023 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms