RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 EPHA10Q5JZY3 1008 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 UBXN11Q5T124 520 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 NLRP10Q86W26 655 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 HSCBQ8IWL3 235 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 SLC43A3Q8NBI5 491 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 RUFY2Q8WXA3 655 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 KCTD13Q8WZ19 329 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 KAZALD1Q96I82 304 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 ST7Q9NRC1 585 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 DIAPH3Q9NSV4 1193 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 TRMT112Q9UI30 125 aaKnown RBP8.42□□□□□ -1.06
CHPT1-203ENST00000546873 SH3TC1Q8TE82 1336 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 ZNF609O15014 1411 aa8.42□□□□□ -1.06
CHPT1-203ENST00000546873 ADAMTSL1Q8N6G6 1762 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 RFX7Q2KHR2 1363 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 IQCA1LA6NCM1 817 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 H7BY64 318 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 C8BP07358 591 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 SMAD4Q13485 552 aaKnown RBP8.41□□□□□ -1.06
CHPT1-203ENST00000546873 SLC10A6Q3KNW5 377 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 ANKS3Q6ZW76 656 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 MIB1Q86YT6 1006 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 CCDC103Q8IW40 242 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 Q8N1Y9 231 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 TMEM145Q8NBT3 493 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 KREMEN2Q8NCW0 462 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 RCBTB1Q8NDN9 531 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 UTP14AQ9BVJ6 771 aaKnown RBP8.41□□□□□ -1.06
CHPT1-203ENST00000546873 CLDND1Q9NY35 253 aa8.41□□□□□ -1.06
CHPT1-203ENST00000546873 TMEFF2Q9UIK5 374 aaPredicted RBP8.41□□□□□ -1.06
CHPT1-203ENST00000546873 SPEF2Q9C093 1822 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 DLEC1Q9Y238 1755 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 ABCC12Q96J65 1359 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 EYA2O00167 538 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-203ENST00000546873 PDE8AO60658 829 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 DGKIO75912 1065 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 CAMTA2O94983 1202 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 RFX5P48382 616 aaPredicted RBP8.4□□□□□ -1.06
CHPT1-203ENST00000546873 PPP2R2AP63151 447 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 NKX3-2P78367 333 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 TESK1Q15569 626 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 SF1Q15637 639 aaKnown RBP8.4□□□□□ -1.06
CHPT1-203ENST00000546873 PRSS53Q2L4Q9 553 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 FAM126BQ8IXS8 530 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 LINC00482Q8N8I6 264 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 KYQ8NBH2 561 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 HNRNPLLQ8WVV9 542 aaKnown RBP8.4□□□□□ -1.06
CHPT1-203ENST00000546873 EVI5LQ96CN4 794 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 FAM89AQ96GI7 184 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 GORASP1Q9BQQ3 440 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 NYXQ9GZU5 481 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 GPR108Q9NPR9 543 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 FPGT-TNNI3KV9GXZ4 949 aa8.4□□□□□ -1.06
CHPT1-203ENST00000546873 MYH14Q7Z406 1995 aaKnown RBP8.4□□□□□ -1.06
CHPT1-203ENST00000546873 DDX60Q8IY21 1712 aaKnown RBP8.4□□□□□ -1.07
CHPT1-203ENST00000546873 UBN2Q6ZU65 1347 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 RAD50Q92878 1312 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 EPB41L2O43491 1005 aaKnown RBP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 MAFKO60675 156 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 IGSF3O75054 1194 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 EPHX2P34913 555 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 ECE1P42892 770 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 PLP2Q04941 152 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 DLX2Q07687 328 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 TFCP2Q12800 502 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 MAP4K2Q12851 820 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 HLFQ16534 295 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 HABP4Q5JVS0 413 aaKnown RBP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 ZNF34Q8IZ26 560 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 ZNF622Q969S3 477 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 C11orf84Q9BUA3 381 aaPredicted RBP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 BDH2Q9BUT1 245 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 TAOK3Q9H2K8 898 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 EPB41L1Q9H4G0 881 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 NIP7Q9Y221 180 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHPT1-203ENST00000546873 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
CHPT1-203ENST00000546873 RTL9Q8NET4 1388 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 ARAP2Q8WZ64 1704 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 H0YIN7 160 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 TRAF5O00463 557 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 NPHP1O15259 732 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 SERPINB2P05120 415 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 RABEP1Q15276 862 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 DDR2Q16832 855 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 FAM124AQ86V42 546 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
CHPT1-203ENST00000546873 CCDC8Q9H0W5 538 aaPredicted RBP8.38□□□□□ -1.07
CHPT1-203ENST00000546873 CNNM1Q9NRU3 951 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms