RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
PTCH1-212ENST00000546744 ATP6V1G2O95670 118 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 ZBED1O96006 694 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 TMEM191BP0C7N4 346 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 TAP1Q03518 808 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DDR1Q08345 913 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 KCNB2Q92953 911 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 RBM12Q9NTZ6 932 aaKnown RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CNOT8Q9UFF9 292 aaKnown RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PCDHB4Q9Y5E5 795 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 NWD1Q149M9 1564 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 LRRN2O75325 713 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CALB1P05937 261 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 NAB2Q15742 525 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 RSPH3Q86UC2 560 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CHP1Q99653 195 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CPDO75976 1380 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 A0A1B0GW55 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 LIN7AO14910 233 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 CFBP00751 764 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L2P0CJ85 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L3P0CJ86 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L4P0CJ87 422 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L5P0CJ88 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L6P0CJ89 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4L7P0CJ90 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 MAP3K7CLP57077 242 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 ROR2Q01974 943 aaKnown RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 LRRC41Q15345 812 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PSMC3IPQ9P2W1 217 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 DUX4Q9UBX2 424 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 ANAPC7Q9UJX3 599 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 KRT7P08729 469 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 KRT16P08779 473 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 ARL4AP40617 200 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 SCYL2Q6P3W7 929 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 PAWRQ96IZ0 340 aaKnown RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 KRT82Q9NSB4 513 aa13.6□□□□□ -0.23
PTCH1-212ENST00000546744 SCHIP1Q9P0W5 487 aaPredicted RBP13.6□□□□□ -0.23
PTCH1-212ENST00000546744 GSTA4O15217 222 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 NCK2O43639 380 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 MAP4P27816 1152 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 CARSP49589 748 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 SERPINB9P50453 376 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 DPYDQ12882 1025 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 C16orf89Q6UX73 402 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 CLMNQ96JQ2 1002 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 GGA1Q9UJY5 639 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ATP11BQ9Y2G3 1177 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 TMEM120BA0PK00 339 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ADCY3O60266 1144 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 INPP5AQ14642 412 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 TRADDQ15628 312 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 SPOPLQ6IQ16 392 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 FBXL13Q8NEE6 735 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 B4GALNT2Q8NHY0 566 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 DNAJC7Q99615 494 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 PCDHA1Q9Y5I3 950 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 SLC16A3O15427 465 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 A1BGP04217 495 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 FNTAP49354 379 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 LRRC14Q15048 493 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 XKR9Q5GH70 373 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 PRUNE1Q86TP1 453 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 OR9Q1Q8NGQ5 310 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ZNF564Q8TBZ8 553 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-212ENST00000546744 SDR42E1Q8WUS8 393 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 ANKS1AQ92625 1134 aa13.59□□□□□ -0.23
PTCH1-212ENST00000546744 CES2O00748 559 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 ZBED4O75132 1171 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.23
PTCH1-212ENST00000546744 SMARCA1P28370 1054 aa13.58□□□□□ -0.23
PTCH1-212ENST00000546744 HSD17B3P37058 310 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms