RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ACKR2O00590 384 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 B4GALT5O43286 388 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 AMHP03971 560 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 EDN1P05305 212 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 PRKCBP05771 671 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 MAPTP10636 758 aaKnown RBP22.89■■□□□ 1.26
SCARB1-211ENST00000546215 ATP2A2P16615 1042 aaKnown RBP22.89■■□□□ 1.26
SCARB1-211ENST00000546215 GAP43P17677 238 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 ARF4P18085 180 aaPredicted RBP22.89■■□□□ 1.26
SCARB1-211ENST00000546215 AXLP30530 894 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 ASIC1P78348 528 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 FAM109BQ6ICB4 259 aaPredicted RBP22.89■■□□□ 1.26
SCARB1-211ENST00000546215 SLC24A5Q71RS6 500 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 HAUS6Q7Z4H7 955 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 CCDC65Q8IXS2 484 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 MYOCDQ8IZQ8 938 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 TOP1MTQ969P6 601 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 SLC9A7Q96T83 725 aa22.89■■□□□ 1.26
SCARB1-211ENST00000546215 PHLPP2Q6ZVD8 1323 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 TTLL13PA6NNM8 815 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 FAM189BP81408 668 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 NCBP1Q09161 790 aaKnown RBP22.89■■□□□ 1.25
SCARB1-211ENST00000546215 HERC4Q5GLZ8 1057 aaPredicted RBP22.89■■□□□ 1.25
SCARB1-211ENST00000546215 TMCO2Q7Z6W1 182 aaPredicted RBP22.89■■□□□ 1.25
SCARB1-211ENST00000546215 CRIPAKQ8N1N5 446 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 CPB2Q96IY4 423 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 C1orf112Q9NSG2 853 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 DACT1Q9NYF0 836 aa22.89■■□□□ 1.25
SCARB1-211ENST00000546215 CNTNAP2Q9UHC6 1331 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 H0YCG3 227 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 MYL1P05976 194 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 NMT1P30419 496 aaKnown RBP22.88■■□□□ 1.25
SCARB1-211ENST00000546215 COASYQ13057 564 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 LRIT3Q3SXY7 679 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 NOTUMQ6P988 496 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 UNC13DQ70J99 1090 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 ST6GALNAC4Q9H4F1 302 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 OLFML3Q9NRN5 406 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 USP20Q9Y2K6 914 aa22.88■■□□□ 1.25
SCARB1-211ENST00000546215 A0A1B0GUA9 196 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 K7ENM7 598 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 GTPBP6O43824 516 aaPredicted RBP22.87■■□□□ 1.25
SCARB1-211ENST00000546215 SARSP49591 514 aaKnown RBP22.87■■□□□ 1.25
SCARB1-211ENST00000546215 PRPF4BQ13523 1007 aaKnown RBP22.87■■□□□ 1.25
SCARB1-211ENST00000546215 NT5DC1Q5TFE4 455 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 TWF2Q6IBS0 349 aaKnown RBP22.87■■□□□ 1.25
SCARB1-211ENST00000546215 KANK3Q6NY19 840 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 ZNF720Q7Z2F6 126 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 HERC6Q8IVU3 1022 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 SLC17A8Q8NDX2 589 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 TIGD1Q96MW7 591 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 LMBRD1Q9NUN5 540 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 TBC1D7Q9P0N9 293 aa22.87■■□□□ 1.25
SCARB1-211ENST00000546215 A0A0U1RQF3 1178 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-211ENST00000546215 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.86■■□□□ 1.25
SCARB1-211ENST00000546215 PVALEFA0A1B0GWK0 134 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 GRXCR1A8MXD5 290 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 KLRC4O43908 158 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 PRR29P0C7W0 189 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 SCP2P22307 547 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 GTF2BQ00403 316 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 EHHADHQ08426 723 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 UBXN11Q5T124 520 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 STRA6Q9BX79 667 aa22.86■■□□□ 1.25
SCARB1-211ENST00000546215 MRPL44Q9H9J2 332 aaKnown RBP22.86■■□□□ 1.25
SCARB1-211ENST00000546215 UPP2O95045 317 aa22.85■■□□□ 1.25
SCARB1-211ENST00000546215 GJB5O95377 273 aa22.85■■□□□ 1.25
SCARB1-211ENST00000546215 DPYDQ12882 1025 aa22.85■■□□□ 1.25
SCARB1-211ENST00000546215 CCDC51Q96ER9 411 aa22.85■■□□□ 1.25
SCARB1-211ENST00000546215 TBX20Q9UMR3 447 aa22.85■■□□□ 1.25
SCARB1-211ENST00000546215 PPP1R37O75864 691 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 STRN3Q13033 797 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 ZC2HC1CQ53FD0 456 aaPredicted RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 CDR2LQ86X02 465 aaPredicted RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 ECHDC2Q86YB7 292 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 HPS3Q969F9 1004 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 CCDC34Q96HJ3 373 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 ACO2Q99798 780 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 MRPL4Q9BYD3 311 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 FGFBP2Q9BYJ0 223 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 ELAC1Q9H777 363 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 FAM105AQ9NUU6 356 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 CASP5P51878 434 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 RABGGTBP53611 331 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 POSTNQ15063 836 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 FAM117BQ6P1L5 589 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 SLC27A1Q6PCB7 646 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 ZNF598Q86UK7 904 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 NPAS4Q8IUM7 802 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 TARS2Q9BW92 718 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 EIF2AQ9BY44 585 aaKnown RBP22.84■■□□□ 1.25
SCARB1-211ENST00000546215 PDZD7Q9H5P4 517 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 PCDHB7Q9Y5E2 793 aa22.84■■□□□ 1.25
SCARB1-211ENST00000546215 KINO60870 393 aaKnown RBP22.83■■□□□ 1.25
SCARB1-211ENST00000546215 ZNF623O75123 536 aa22.83■■□□□ 1.25
SCARB1-211ENST00000546215 ATF7P17544 494 aaPredicted RBP22.83■■□□□ 1.25
SCARB1-211ENST00000546215 ABCD1P33897 745 aa22.83■■□□□ 1.25
SCARB1-211ENST00000546215 ATF7IP2Q5U623 682 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms