RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 URGCPQ8TCY9 931 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 RSAD1Q9HA92 442 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 CNTNAP2Q9UHC6 1331 aa25.29■■□□□ 1.64
CHD4-214ENST00000545942 SPATA31C1P0DKV0 1188 aa25.28■■□□□ 1.64
CHD4-214ENST00000545942 AXLP30530 894 aa25.28■■□□□ 1.64
CHD4-214ENST00000545942 ARL2P36404 184 aa25.28■■□□□ 1.64
CHD4-214ENST00000545942 RBM25P49756 843 aaKnown RBP25.28■■□□□ 1.64
CHD4-214ENST00000545942 NCBP1Q09161 790 aaKnown RBP25.28■■□□□ 1.64
CHD4-214ENST00000545942 IFNLR1Q8IU57 520 aaPredicted RBP25.28■■□□□ 1.64
CHD4-214ENST00000545942 GBP3Q9H0R5 595 aa25.28■■□□□ 1.64
CHD4-214ENST00000545942 TUFT1Q9NNX1 390 aa25.28■■□□□ 1.64
CHD4-214ENST00000545942 ARID2Q68CP9 1835 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 C2orf71A6NGG8 1288 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 INO80B-WBP1J3KQ70 363 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 TSPAN1O60635 241 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 GALTP07902 379 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 NCLP19338 710 aaKnown RBP25.27■■□□□ 1.64
CHD4-214ENST00000545942 TECP42680 631 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 GNL2Q13823 731 aaKnown RBP25.27■■□□□ 1.64
CHD4-214ENST00000545942 CAPSQ13938 189 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 NOTUMQ6P988 496 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 TMEM173Q86WV6 379 aaPredicted RBP25.27■■□□□ 1.64
CHD4-214ENST00000545942 CATSPER3Q86XQ3 398 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 VPS52Q8N1B4 723 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 CNNM3Q8NE01 707 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 ASAP3Q8TDY4 903 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 IGSF21Q96ID5 467 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 NFKBIZQ9BYH8 718 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 KANSL3Q9P2N6 904 aa25.27■■□□□ 1.64
CHD4-214ENST00000545942 C5orf42Q9H799 3197 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 A0A087WWV3 80 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 PRR33A8MZF0 331 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 USO1O60763 962 aaKnown RBP25.26■■□□□ 1.63
CHD4-214ENST00000545942 OR52Z1P0C646 297 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 ZNF174Q15697 407 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 ANKRD54Q6NXT1 300 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 LLGL2Q6P1M3 1020 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 DDX53Q86TM3 631 aaKnown RBP25.26■■□□□ 1.63
CHD4-214ENST00000545942 NOSTRINQ8IVI9 506 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 ERMNQ8TAM6 284 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 CCDC51Q96ER9 411 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 ZBP1Q9H171 429 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 UBN1Q9NPG3 1134 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 DNAJB4Q9UDY4 337 aa25.26■■□□□ 1.63
CHD4-214ENST00000545942 GLRA2P23416 452 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 CA8P35219 290 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 MBTD1Q05BQ5 628 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 TTC38Q5R3I4 469 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 ZNF280BQ86YH2 543 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 RNF135Q8IUD6 432 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 SMG8Q8ND04 991 aaKnown RBP25.25■■□□□ 1.63
CHD4-214ENST00000545942 SUSD6Q92537 303 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 CASP10Q92851 521 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 POLR3CQ9BUI4 534 aaPredicted RBP25.25■■□□□ 1.63
CHD4-214ENST00000545942 PHF7Q9BWX1 381 aaPredicted RBP25.25■■□□□ 1.63
CHD4-214ENST00000545942 POLR3FQ9H1D9 316 aaPredicted RBP25.25■■□□□ 1.63
CHD4-214ENST00000545942 DBR1Q9UK59 544 aaKnown RBP25.25■■□□□ 1.63
CHD4-214ENST00000545942 HCN4Q9Y3Q4 1203 aa25.25■■□□□ 1.63
CHD4-214ENST00000545942 LOC730098B7Z3J9 87 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 MED24O75448 989 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 CXCL14O95715 111 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 ITGA4P13612 1032 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 HOXB8P17481 243 aaPredicted RBP25.24■■□□□ 1.63
CHD4-214ENST00000545942 TRAPPC10P48553 1259 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 SLC11A1P49279 550 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 BCL7CQ8WUZ0 217 aaPredicted RBP25.24■■□□□ 1.63
CHD4-214ENST00000545942 CPB2Q96IY4 423 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 FAM193BQ96PV7 902 aaPredicted RBP25.24■■□□□ 1.63
CHD4-214ENST00000545942 NACC1Q96RE7 527 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 EIF2AQ9BY44 585 aaKnown RBP25.24■■□□□ 1.63
CHD4-214ENST00000545942 CSRNP2Q9H175 543 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 S1PR5Q9H228 398 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 IPPQ9Y573 584 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 HCFC2Q9Y5Z7 792 aa25.24■■□□□ 1.63
CHD4-214ENST00000545942 B4GALT3O60512 393 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 DDHD2O94830 711 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 CTSAP10619 480 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 RPA1P27694 616 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 AFF1P51825 1210 aaKnown RBP25.23■■□□□ 1.63
CHD4-214ENST00000545942 GIT2Q14161 759 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 AMHR2Q16671 573 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 HERC4Q5GLZ8 1057 aaPredicted RBP25.23■■□□□ 1.63
CHD4-214ENST00000545942 SYCE2Q6PIF2 218 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 MCPH1Q8NEM0 835 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 TMEM175Q9BSA9 504 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 STK39Q9UEW8 545 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 MUTYHQ9UIF7 546 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 NOL7Q9UMY1 257 aaKnown RBP25.23■■□□□ 1.63
CHD4-214ENST00000545942 IRAK3Q9Y616 596 aa25.23■■□□□ 1.63
CHD4-214ENST00000545942 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.22■■□□□ 1.63
CHD4-214ENST00000545942 CLASP2O75122 1294 aaKnown RBP25.22■■□□□ 1.63
CHD4-214ENST00000545942 POMCP01189 267 aa25.22■■□□□ 1.63
CHD4-214ENST00000545942 CBX2Q14781 532 aaPredicted RBP25.22■■□□□ 1.63
CHD4-214ENST00000545942 MAEAQ7L5Y9 396 aa25.22■■□□□ 1.63
CHD4-214ENST00000545942 TMEM87AQ8NBN3 555 aa25.22■■□□□ 1.63
CHD4-214ENST00000545942 GPRC5CQ9NQ84 441 aa25.22■■□□□ 1.63
CHD4-214ENST00000545942 ALDH2P05091 517 aa25.21■■□□□ 1.63
CHD4-214ENST00000545942 ARF4P18085 180 aaPredicted RBP25.21■■□□□ 1.63
CHD4-214ENST00000545942 TPRNQ4KMQ1 711 aa25.21■■□□□ 1.63
CHD4-214ENST00000545942 HAUS3Q68CZ6 603 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms