RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 LIG1P18858 919 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 LTBRP36941 435 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 HIC1Q14526 733 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
LTBR-214ENST00000545445 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
LTBR-214ENST00000545445 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
LTBR-214ENST00000545445 IER5LQ5T953 404 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 PSPC1Q8WXF1 523 aaKnown RBP13.1□□□□□ -0.31
LTBR-214ENST00000545445 SAMD11Q96NU1 681 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 C5orf42Q9H799 3197 aa13.1□□□□□ -0.31
LTBR-214ENST00000545445 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
LTBR-214ENST00000545445 UPP2O95045 317 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 ARL2P36404 184 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 PTPN5P54829 565 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
LTBR-214ENST00000545445 PPP2R5AQ15172 486 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 SMAD2Q15796 467 aaKnown RBP13.09□□□□□ -0.31
LTBR-214ENST00000545445 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 RNF135Q8IUD6 432 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 TMEM192Q8IY95 271 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 KIAA0319LQ8IZA0 1049 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 DDX12PQ92771 950 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 RUSC1Q9BVN2 902 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
LTBR-214ENST00000545445 SUCLA2Q9P2R7 463 aaPredicted RBP13.09□□□□□ -0.31
LTBR-214ENST00000545445 MYMKA6NI61 221 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 M0QZ92 97 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
LTBR-214ENST00000545445 CSPG5O95196 566 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 SCP2P22307 547 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 THPOP40225 353 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 CLCN3P51790 818 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 POU5F1BQ06416 359 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 GIT2Q14161 759 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 TFDP1Q14186 410 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 FAM102BQ5T8I3 360 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 RUFY4Q6ZNE9 571 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 LRRC71Q8N4P6 559 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 DNAJB3Q8WWF6 145 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 TMEM143Q96AN5 459 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 IFT74Q96LB3 600 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
LTBR-214ENST00000545445 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 LARSQ9P2J5 1176 aaKnown RBP13.08□□□□□ -0.32
LTBR-214ENST00000545445 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 AKT3Q9Y243 479 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 COL4A3BPQ9Y5P4 624 aa13.08□□□□□ -0.32
LTBR-214ENST00000545445 PVALEFA0A1B0GWK0 134 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 RSPH10B2B2RC85 870 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 MBTPS2O43462 519 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 HIP1RO75146 1068 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 TBX10O75333 385 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 FAM13AO94988 1023 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 RSPH10BP0C881 870 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 GAP43P17677 238 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 ABCD1P33897 745 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 CTNNB1P35222 781 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 AFMP43652 599 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 ZNF131P52739 623 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 HYAL1Q12794 435 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 TCF15Q12870 199 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 POSTNQ15063 836 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 SKOR2Q2VWA4 1001 aaPredicted RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 MAEAQ7L5Y9 396 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 PRPF31Q8WWY3 499 aaKnown RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 EDAQ92838 391 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 CCDC47Q96A33 483 aaKnown RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 DNAJC19Q96DA6 116 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 REEP2Q9BRK0 252 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 OSBPL7Q9BZF2 842 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 POLR3FQ9H1D9 316 aaPredicted RBP13.07□□□□□ -0.32
LTBR-214ENST00000545445 PARVGQ9HBI0 331 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
LTBR-214ENST00000545445 COL4A6Q14031 1691 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 TECTAO75443 2155 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 TMEM221A6NGB7 291 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 H0YCG3 227 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 M0R296 226 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 SMC2O95347 1197 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 CTSHP09668 335 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 PLS3P13797 630 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 GTF2F1P35269 517 aaKnown RBP eCLIP13.06□□□□□ -0.32
LTBR-214ENST00000545445 NAMPTP43490 491 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 SMTNP53814 917 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 ASIC1P78348 528 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
LTBR-214ENST00000545445 LAMTOR4Q0VGL1 99 aa13.06□□□□□ -0.32
LTBR-214ENST00000545445 MAPK7Q13164 816 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms