RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 PPP1R2P41236 205 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 CASP5P51878 434 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 NFX1Q12986 1120 aaKnown RBP14.28□□□□□ -0.12
CDCA3-210ENST00000545368 PRPF4BQ13523 1007 aaKnown RBP14.28□□□□□ -0.12
CDCA3-210ENST00000545368 MORC3Q14149 939 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 FAM187BQ17R55 369 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 MYOCDQ8IZQ8 938 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 SYCP3Q8IZU3 236 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 MRPL4Q9BYD3 311 aaKnown RBP14.28□□□□□ -0.12
CDCA3-210ENST00000545368 IFIH1Q9BYX4 1025 aaKnown RBP14.28□□□□□ -0.12
CDCA3-210ENST00000545368 FZD8Q9H461 694 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
CDCA3-210ENST00000545368 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
CDCA3-210ENST00000545368 TSPAN1O60635 241 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 NBNO60934 754 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 CAPN15O75808 1086 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 PRPF6O94906 941 aaKnown RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 SYN1P17600 705 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 LIG4P49917 911 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 PPIGQ13427 754 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 EPM2AIP1Q7L775 607 aaPredicted RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 NELFCDQ8IXH7 590 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 GLIS3Q8NEA6 775 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 ZNF507Q8TCN5 953 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 SCFD1Q8WVM8 642 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 SEPT8Q92599 483 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 APBB2Q92870 758 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 LBHD1Q9BQE6 289 aaPredicted RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 STRA6Q9BX79 667 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 AGO3Q9H9G7 860 aaKnown RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 ERVK-5Q9HDB9 667 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 DACH1Q9UI36 760 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 ZMYND8Q9ULU4 1186 aaPredicted RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 PADI3Q9ULW8 664 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.13
CDCA3-210ENST00000545368 PIN4Q9Y237 131 aaKnown RBP14.27□□□□□ -0.13
CDCA3-210ENST00000545368 HNRNPDLO14979 420 aaKnown RBP14.26□□□□□ -0.13
CDCA3-210ENST00000545368 CXCL10P02778 98 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 PFKMP08237 780 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 CSF2RAP15509 400 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-210ENST00000545368 ITGB8P26012 769 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 NLRP12P59046 1061 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 FPGSQ05932 587 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 AMHR2Q16671 573 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 COBLL1Q53SF7 1204 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 NOTUMQ6P988 496 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 ZPBP2Q6X784 338 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 TAS1R3Q7RTX0 852 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 APBB1IPQ7Z5R6 666 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-210ENST00000545368 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-210ENST00000545368 GUF1Q8N442 669 aaKnown RBP14.26□□□□□ -0.13
CDCA3-210ENST00000545368 FTHL17Q9BXU8 183 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 CHST12Q9NRB3 414 aa14.26□□□□□ -0.13
CDCA3-210ENST00000545368 SYCE3A1L190 88 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 PSMA7O14818 248 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 N4BP3O15049 544 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 B4GALT5O43286 388 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 PIGRP01833 764 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ARF4P18085 180 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-210ENST00000545368 PRCPP42785 496 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDCA3-210ENST00000545368 STX1AQ16623 288 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 KNOP1Q1ED39 458 aaKnown RBP14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ZSCAN23Q3MJ62 389 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ATF7IP2Q5U623 682 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 CNKSR3Q6P9H4 555 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 MLKLQ8NB16 471 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 BADQ92934 168 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 CCDC51Q96ER9 411 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 CPB2Q96IY4 423 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ADPGKQ9BRR6 497 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 TARS2Q9BW92 718 aaKnown RBP14.25□□□□□ -0.13
CDCA3-210ENST00000545368 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ANO10Q9NW15 660 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 MAPK8IP1Q9UQF2 711 aa14.25□□□□□ -0.13
CDCA3-210ENST00000545368 ZMYM2Q9UBW7 1377 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 TOM1L1O75674 476 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 ACTN1P12814 892 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 BMP6P22004 513 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 RGS19P49795 217 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 TYRO3Q06418 890 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 KCNA1Q09470 495 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 TWF2Q6IBS0 349 aaKnown RBP14.24□□□□□ -0.13
CDCA3-210ENST00000545368 SLFN12LQ6IEE8 588 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 HS2ST1Q7LGA3 356 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 ADSSL1Q8N142 457 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 DBF4BQ8NFT6 615 aa14.24□□□□□ -0.13
CDCA3-210ENST00000545368 GOLGA5Q8TBA6 731 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms