RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 CDCA2Q69YH5 1023 aaPredicted RBP18.76■□□□□ 0.59
HOXD8-204ENST00000544999 AGMOQ6ZNB7 445 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 EP400NLQ6ZTU2 488 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 ADGRD2Q7Z7M1 963 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 SLC39A11Q8N1S5 342 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 RSAD1Q9HA92 442 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
HOXD8-204ENST00000544999 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
HOXD8-204ENST00000544999 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
HOXD8-204ENST00000544999 H3BQ06 376 aaPredicted RBP18.75■□□□□ 0.59
HOXD8-204ENST00000544999 GTF2F1P35269 517 aaKnown RBP eCLIP18.75■□□□□ 0.59
HOXD8-204ENST00000544999 PBX3P40426 434 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 BCAR1P56945 870 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 KRT17Q04695 432 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 ZBTB8OSQ8IWT0 167 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 URGCPQ8TCY9 931 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 CPB2Q96IY4 423 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 NECAB3Q96P71 396 aaPredicted RBP18.75■□□□□ 0.59
HOXD8-204ENST00000544999 CSRNP2Q9H175 543 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 C2orf40Q9H1Z8 148 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 IGFLR1Q9H665 355 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 UBN1Q9NPG3 1134 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 TBC1D13Q9NVG8 400 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 INPP5FQ9Y2H2 1132 aa18.75■□□□□ 0.59
HOXD8-204ENST00000544999 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 EYA4O95677 639 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 ARF4P18085 180 aaPredicted RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 LTBRP36941 435 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 ERVFC1P60507 584 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 ADAM15Q13444 863 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 PPP2R5AQ15172 486 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 ARL6IP4Q66PJ3 421 aaKnown RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 PTCRAQ6ISU1 281 aaPredicted RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 BRAPQ7Z569 592 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 EFHBQ8N7U6 833 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 PRIMPOLQ96LW4 560 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 CDCA3Q99618 268 aaPredicted RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 EIF2AQ9BY44 585 aaKnown RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 NRDE2Q9H7Z3 1164 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
HOXD8-204ENST00000544999 DNM3Q9UQ16 869 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 IPPQ9Y573 584 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 PCDHGC5Q9Y5F6 944 aa18.74■□□□□ 0.59
HOXD8-204ENST00000544999 FSD2A1L4K1 749 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 GRXCR2A6NFK2 248 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
HOXD8-204ENST00000544999 ITGA4P13612 1032 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 PDCP20941 246 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 NAMPTP43490 491 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 NRIP1P48552 1158 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 RNASELQ05823 741 aaKnown RBP18.73■□□□□ 0.59
HOXD8-204ENST00000544999 FAM187BQ17R55 369 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 BSNDQ8WZ55 320 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 KIFAP3Q92845 792 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 MMTAG2Q9BU76 263 aaKnown RBP18.73■□□□□ 0.59
HOXD8-204ENST00000544999 FZD8Q9H461 694 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 NGRNQ9NPE2 291 aaKnown RBP18.73■□□□□ 0.59
HOXD8-204ENST00000544999 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
HOXD8-204ENST00000544999 A0A0C4DFX4 3053 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 A0A1B0GUA9 196 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 NT5C1B-RDH14C9J2C7 533 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 E9PMD0 336 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 LINC01565O15544 149 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 B4GALT5O43286 388 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 TBX10O75333 385 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 IL9P15248 144 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 CDC25AP30304 524 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 DLX2Q07687 328 aaPredicted RBP18.72■□□□□ 0.59
HOXD8-204ENST00000544999 HYIQ5T013 277 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 PLPP4Q5VZY2 271 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 SLC27A1Q6PCB7 646 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 RBM23Q86U06 439 aaKnown RBP18.72■□□□□ 0.59
HOXD8-204ENST00000544999 HACE1Q8IYU2 909 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 KCTD17Q8N5Z5 321 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 DEPTORQ8TB45 409 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 INTS4Q96HW7 963 aaKnown RBP18.72■□□□□ 0.59
HOXD8-204ENST00000544999 IFT74Q96LB3 600 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 TCF25Q9BQ70 676 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
HOXD8-204ENST00000544999 TLE6Q9H808 572 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 ENTPD7Q9NQZ7 604 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 FAM50BQ9Y247 325 aa18.72■□□□□ 0.59
HOXD8-204ENST00000544999 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 INPPL1O15357 1258 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 BMP15O95972 392 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 GALTP07902 379 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 NDUFV1P49821 464 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 MAPK6Q16659 721 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 DUSP6Q16828 381 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 FAM193BQ96PV7 902 aaPredicted RBP18.71■□□□□ 0.59
HOXD8-204ENST00000544999 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 GIT1Q9Y2X7 761 aa18.71■□□□□ 0.59
HOXD8-204ENST00000544999 VPS37CA5D8V6 355 aaPredicted RBP18.7■□□□□ 0.58
HOXD8-204ENST00000544999 NPTXRO95502 500 aa18.7■□□□□ 0.58
HOXD8-204ENST00000544999 AFF1P51825 1210 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms