RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ABI1Q8IZP0 508 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 HELQQ8TDG4 1101 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 EIF2AQ9BY44 585 aaKnown RBP24.06■■□□□ 1.44
OTUB1-212ENST00000543988 PRMT7Q9NVM4 692 aaPredicted RBP24.06■■□□□ 1.44
OTUB1-212ENST00000543988 CNTNAP2Q9UHC6 1331 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 COL6A3P12111 3177 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 TTLL13PA6NNM8 815 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 CCDC169A6NNP5 214 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 SFI1A8K8P3 1242 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 EDN1P05305 212 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 PRKCBP05771 671 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 LIG1P18858 919 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 CACNB1Q02641 598 aaPredicted RBP24.05■■□□□ 1.44
OTUB1-212ENST00000543988 NCBP1Q09161 790 aaKnown RBP24.05■■□□□ 1.44
OTUB1-212ENST00000543988 MAPK6Q16659 721 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 FAM187BQ17R55 369 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 ATL3Q6DD88 541 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 CDR2LQ86X02 465 aaPredicted RBP24.05■■□□□ 1.44
OTUB1-212ENST00000543988 LARP4BQ92615 738 aaKnown RBP24.05■■□□□ 1.44
OTUB1-212ENST00000543988 CHAMP1Q96JM3 812 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 PRIMPOLQ96LW4 560 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 REEP2Q9BRK0 252 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 CCDC39Q9UFE4 941 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 USP20Q9Y2K6 914 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 RWDD3Q9Y3V2 267 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 MTCH2Q9Y6C9 303 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 MYH15Q9Y2K3 1946 aa24.05■■□□□ 1.44
OTUB1-212ENST00000543988 MYO9BQ13459 2157 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 A0A087X0B3 334 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 C5orf67F2Z3F1 127 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 EFNA5P52803 228 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 NAALADL2Q58DX5 795 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 MRPL10Q7Z7H8 261 aaKnown RBP24.04■■□□□ 1.44
OTUB1-212ENST00000543988 LRRC43Q8N309 656 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 SMG8Q8ND04 991 aaKnown RBP24.04■■□□□ 1.44
OTUB1-212ENST00000543988 KCNG4Q8TDN1 519 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 TYW1Q9NV66 732 aaKnown RBP24.04■■□□□ 1.44
OTUB1-212ENST00000543988 STK17AQ9UEE5 414 aa24.04■■□□□ 1.44
OTUB1-212ENST00000543988 H3BNC9 293 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 GTPBP6O43824 516 aaPredicted RBP24.03■■□□□ 1.44
OTUB1-212ENST00000543988 PLS3P13797 630 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 POU3F3P20264 500 aaPredicted RBP24.03■■□□□ 1.44
OTUB1-212ENST00000543988 GPM6BQ13491 265 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 PRPF4BQ13523 1007 aaKnown RBP24.03■■□□□ 1.44
OTUB1-212ENST00000543988 RRAGBQ5VZM2 374 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 LRRC55Q6ZSA7 311 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 MICALL1Q8N3F8 863 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 C11orf84Q9BUA3 381 aaPredicted RBP24.03■■□□□ 1.44
OTUB1-212ENST00000543988 C17orf75Q9HAS0 396 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 KMT5AQ9NQR1 393 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 ARHGAP28Q9P2N2 729 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 IPPQ9Y573 584 aa24.03■■□□□ 1.44
OTUB1-212ENST00000543988 A0A1B0GUA9 196 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 ACKR2O00590 384 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 CUTAO60888 179 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 DDIT3P35638 169 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 AXDND1Q5T1B0 1012 aaPredicted RBP24.02■■□□□ 1.44
OTUB1-212ENST00000543988 SLC27A1Q6PCB7 646 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 GLB1LQ6UWU2 654 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 AGMOQ6ZNB7 445 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 SPIRE2Q8WWL2 714 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 PGBD4Q96DM1 585 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 PLVAPQ9BX97 442 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 PANK2Q9BZ23 570 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 NXF3Q9H4D5 531 aaKnown RBP24.02■■□□□ 1.44
OTUB1-212ENST00000543988 PDZD7Q9H5P4 517 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 CWH43Q9H720 699 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 CFAP45Q9UL16 551 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 PHLPP2Q6ZVD8 1323 aa24.02■■□□□ 1.44
OTUB1-212ENST00000543988 SLC16A4O15374 487 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 NPTXRO95502 500 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 RB1P06400 928 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 NCLP19338 710 aaKnown RBP24.01■■□□□ 1.43
OTUB1-212ENST00000543988 ME1P48163 572 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 TMEM132AQ24JP5 1023 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 SPOUT1Q5T280 376 aaKnown RBP24.01■■□□□ 1.43
OTUB1-212ENST00000543988 SHC4Q6S5L8 630 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 CCDC73Q6ZRK6 1079 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 TAS1R3Q7RTX0 852 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 RNF39Q9H2S5 420 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 ODF2LQ9ULJ1 636 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 INPP5FQ9Y2H2 1132 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 HES2Q9Y543 173 aa24.01■■□□□ 1.43
OTUB1-212ENST00000543988 KRT18P05783 430 aaKnown RBP24■■□□□ 1.43
OTUB1-212ENST00000543988 STAT6P42226 847 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 CCDC85BQ15834 202 aaPredicted RBP24■■□□□ 1.43
OTUB1-212ENST00000543988 NOMO2Q5JPE7 1267 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 NT5DC1Q5TFE4 455 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 PDILTQ8N807 584 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 COLGALT1Q8NBJ5 622 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 PPM1EQ8WY54 764 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 MRPL9Q9BYD2 267 aaKnown RBP24■■□□□ 1.43
OTUB1-212ENST00000543988 TRIM6Q9C030 488 aaPredicted RBP24■■□□□ 1.43
OTUB1-212ENST00000543988 RSAD1Q9HA92 442 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 RCOR1Q9UKL0 485 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 PCDHA7Q9UN72 937 aa24■■□□□ 1.43
OTUB1-212ENST00000543988 EYSQ5T1H1 3165 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 K7ERI5 159 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 N4BP3O15049 544 aa23.99■■□□□ 1.43
OTUB1-212ENST00000543988 GRM6O15303 877 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms