RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CBWD2Q8IUF1 395 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 PLEKHO2Q8TD55 490 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 POMGNT1Q8WZA1 660 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 SAAL1Q96ER3 474 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 BICD1Q96G01 975 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 SUGCTQ9HAC7 445 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 PAXBP1Q9Y5B6 917 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 STYXL1Q9Y6J8 313 aa21.61■■□□□ 1.05
COPS7A-218ENST00000543939 A0A0U1RQJ8 604 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 EIF3CLB5ME19 914 aaKnown RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 K7ERI5 159 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 PPFIA4O75335 1185 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 HOXD8P13378 290 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 MYL7Q01449 175 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 CRHR2Q13324 411 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 ZNF484Q5JVG2 852 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 SFMBT2Q5VUG0 894 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 TRAPPC12Q8WVT3 735 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 ATRIPQ8WXE1 791 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 PSPC1Q8WXF1 523 aaKnown RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 ZNF592Q92610 1267 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 EIF3CQ99613 913 aaKnown RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 C16orf70Q9BSU1 422 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 FLRT1Q9NZU1 646 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 PHLPP2Q6ZVD8 1323 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 PLEKP08567 350 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 LIG4P49917 911 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 MXD4Q14582 209 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-218ENST00000543939 HGSNATQ68CP4 663 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 SYT10Q6XYQ8 523 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 LRRC71Q8N4P6 559 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 KIF18AQ8NI77 898 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 MFSD14AQ96MC6 490 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 ZIC5Q96T25 663 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 AIPL1Q9NZN9 384 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 FHOD1Q9Y613 1164 aa21.6■■□□□ 1.05
COPS7A-218ENST00000543939 TMEM88BA6NKF7 163 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 P4HA2O15460 535 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 ADCY6O43306 1168 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 N4BP1O75113 896 aaKnown RBP21.59■■□□□ 1.05
COPS7A-218ENST00000543939 PPP3CAQ08209 521 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 LAMTOR4Q0VGL1 99 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 CDCA2Q69YH5 1023 aaPredicted RBP21.59■■□□□ 1.05
COPS7A-218ENST00000543939 GPD1LQ8N335 351 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 OR6J1Q8NGC5 347 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 CCDC42Q96M95 316 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 GJD2Q9UKL4 321 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 MYO6Q9UM54 1294 aa21.59■■□□□ 1.05
COPS7A-218ENST00000543939 PMM2O15305 246 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 MMP3P08254 477 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 INSRRP14616 1297 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 EFNA5P52803 228 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 TNFAIP2Q03169 654 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 ENPEPQ07075 957 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 MAPK8IP2Q13387 824 aaPredicted RBP21.58■■□□□ 1.05
COPS7A-218ENST00000543939 TMC2Q8TDI7 906 aa21.58■■□□□ 1.05
COPS7A-218ENST00000543939 INTS2Q9H0H0 1204 aaKnown RBP21.58■■□□□ 1.05
COPS7A-218ENST00000543939 SUCLA2Q9P2R7 463 aaPredicted RBP21.58■■□□□ 1.05
COPS7A-218ENST00000543939 SSU72P8A0A1W2PR75 194 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 KIAA0391O15091 583 aaKnown RBP21.58■■□□□ 1.04
COPS7A-218ENST00000543939 C22orf31O95567 290 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 SERPING1P05155 500 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 ZNF286BP0CG31 522 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 EIF4A3P38919 411 aaKnown RBP21.58■■□□□ 1.04
COPS7A-218ENST00000543939 RGS2P41220 211 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 ARHGAP25P42331 645 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 KRT83P78385 493 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 RAPGEF1Q13905 1077 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 PRAMEF19Q5SWL8 479 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 OLFML2BQ68BL8 750 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 LMO3Q8TAP4 145 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 PARD3BQ8TEW8 1205 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 SOCS4Q8WXH5 440 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 CCDC113Q9H0I3 377 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 LZTFL1Q9NQ48 299 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 AJAP1Q9UKB5 411 aaPredicted RBP21.58■■□□□ 1.04
COPS7A-218ENST00000543939 USP20Q9Y2K6 914 aa21.58■■□□□ 1.04
COPS7A-218ENST00000543939 ZSWIM8A7E2V4 1837 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 COL1A2P08123 1366 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 CA12O43570 354 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 IGHA2P01877 340 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 EDN1P05305 212 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 ZNF865P0CJ78 1059 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-218ENST00000543939 JAM2P57087 298 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 CYP24A1Q07973 514 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 CCL14Q16627 93 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 ASTE1Q2TB18 679 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-218ENST00000543939 SLFN12LQ6IEE8 588 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 IQCEQ6IPM2 695 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 EFCAB12Q6NXP0 572 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 TARS2Q9BW92 718 aaKnown RBP21.57■■□□□ 1.04
COPS7A-218ENST00000543939 KIAA1586Q9HCI6 787 aa21.57■■□□□ 1.04
COPS7A-218ENST00000543939 ZNF215Q9UL58 517 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-218ENST00000543939 KAT6AQ92794 2004 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 EXTL3O43909 919 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 LCA5LO95447 670 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 CYP2B6P20813 491 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 GCLMP48507 274 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 SLC9C1Q4G0N8 1177 aa21.56■■□□□ 1.04
COPS7A-218ENST00000543939 EPC2Q52LR7 807 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms