RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 PTPROQ16827 1216 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 CLLU1OSQ5K130 101 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 GLB1LQ6UWU2 654 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 PDILTQ8N807 584 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 SYT2Q8N9I0 419 aaPredicted RBP12.2□□□□□ -0.46
DDB1-222ENST00000543627 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
DDB1-222ENST00000543627 KLHL23Q8NBE8 558 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 FAM193BQ96PV7 902 aaPredicted RBP12.2□□□□□ -0.46
DDB1-222ENST00000543627 C11orf84Q9BUA3 381 aaPredicted RBP12.2□□□□□ -0.46
DDB1-222ENST00000543627 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
DDB1-222ENST00000543627 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
DDB1-222ENST00000543627 NT5C1B-RDH14C9J2C7 533 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 GRM6O15303 877 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 SLC16A4O15374 487 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 LPXNO60711 386 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 POMCP01189 267 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 RB1P06400 928 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 PDIA4P13667 645 aaKnown RBP12.19□□□□□ -0.46
DDB1-222ENST00000543627 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
DDB1-222ENST00000543627 AKAP5P24588 427 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 AXLP30530 894 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 MATR3P43243 847 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDB1-222ENST00000543627 RAB27AP51159 221 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
DDB1-222ENST00000543627 POU5F1BQ06416 359 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 HYIQ5T013 277 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 FAM43BQ6ZT52 329 aaPredicted RBP12.19□□□□□ -0.46
DDB1-222ENST00000543627 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 RAD54LQ92698 747 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 TCHPQ9BT92 498 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 RC3H2Q9HBD1 1191 aaKnown RBP12.19□□□□□ -0.46
DDB1-222ENST00000543627 KLK14Q9P0G3 267 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 IPPQ9Y573 584 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 EYSQ5T1H1 3165 aa12.19□□□□□ -0.46
DDB1-222ENST00000543627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
DDB1-222ENST00000543627 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDB1-222ENST00000543627 OFD1O75665 1012 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 FAM13AO94988 1023 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 HARSP12081 509 aaKnown RBP12.18□□□□□ -0.46
DDB1-222ENST00000543627 DDIT3P35638 169 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 NPTX2P47972 431 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 ME1P48163 572 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 SMTNP53814 917 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 AMHR2Q16671 573 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 NOMO2Q5JPE7 1267 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 ZBTB33Q86T24 672 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
DDB1-222ENST00000543627 HACE1Q8IYU2 909 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 LRRC43Q8N309 656 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 LINC00301Q8NCQ3 95 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 POF1BQ8WVV4 589 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 LARP4BQ92615 738 aaKnown RBP12.18□□□□□ -0.46
DDB1-222ENST00000543627 CLP1Q92989 425 aaKnown RBP12.18□□□□□ -0.46
DDB1-222ENST00000543627 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 ADPGKQ9BRR6 497 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 CWH43Q9H720 699 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
DDB1-222ENST00000543627 N4BP3O15049 544 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 ZNF623O75123 536 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 FGF18O76093 207 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 ITGB1P05556 798 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 LAG3P18627 525 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 GUCY2CP25092 1073 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 STAT6P42226 847 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 ALDH7A1P49419 539 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 AFF1P51825 1210 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 EFNA5P52803 228 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 OSTNP61366 133 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 STRN3Q13033 797 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 PCBP1Q15365 356 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDB1-222ENST00000543627 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 KCNT2Q6UVM3 1135 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 AGMOQ6ZNB7 445 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDB1-222ENST00000543627 DAW1Q8N136 415 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
DDB1-222ENST00000543627 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
DDB1-222ENST00000543627 LRRC15Q8TF66 581 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms