RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ENPP3O14638 875 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 N4BP3O15049 544 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 MGEA5O60502 916 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 TSPAN1O60635 241 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SMC2O95347 1197 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 NPTXRO95502 500 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 RPN1P04843 607 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 MYL1P05976 194 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PRR29P0C7W0 189 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 SKIP12755 728 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 ATP2A2P16615 1042 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 SCP2P22307 547 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 LIG4P49917 911 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 ZNF131P52739 623 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 NCKAP1LP55160 1127 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 WDR5P61964 334 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 DEFB103AP81534 67 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PNOCQ13519 176 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SLC27A1Q6PCB7 646 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.94□□□□□ -1.3
LTBR-212ENST00000543542 CLEC17AQ6ZS10 378 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 UNC13DQ70J99 1090 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SLC24A5Q71RS6 500 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 ZBTB33Q86T24 672 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 CDR2LQ86X02 465 aaPredicted RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 IFNLR1Q8IU57 520 aaPredicted RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 ABI1Q8IZP0 508 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 NOC3LQ8WTT2 800 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 SPIRE2Q8WWL2 714 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SMARCE1Q969G3 411 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 DNAJC19Q96DA6 116 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PGBD4Q96DM1 585 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 TIGD1Q96MW7 591 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SLC9A7Q96T83 725 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 APOL6Q9BWW8 343 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 MRPL4Q9BYD3 311 aaKnown RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 TMX1Q9H3N1 280 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 SLC39A2Q9NP94 309 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 CHST12Q9NRB3 414 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 RGS18Q9NS28 235 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 AGPAT5Q9NUQ2 364 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 RMND1Q9NWS8 449 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
LTBR-212ENST00000543542 EXOC7Q9UPT5 735 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PCDHB7Q9Y5E2 793 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 PCDHB13Q9Y5F0 798 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 ADGRA3Q8IWK6 1321 aa6.94□□□□□ -1.3
LTBR-212ENST00000543542 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 HNRNPDLO14979 420 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 B4GALT5O43286 388 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 TLL1O43897 1013 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 KIF20AO95235 890 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 MBD3O95983 291 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 MYBP10242 640 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 MAPTP10636 758 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 ITGA4P13612 1032 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ARF4P18085 180 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 SARSP49591 514 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 RAB27AP51159 221 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 PSMD2Q13200 908 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 SNW1Q13573 536 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 ALCAMQ13740 583 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 CAMK4Q16566 473 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 FAM187BQ17R55 369 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ZNF568Q3ZCX4 644 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 KMT5BQ4FZB7 885 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ZC2HC1CQ53FD0 456 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 SPOUT1Q5T280 376 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 ATF7IP2Q5U623 682 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 PPP4R3CPQ6ZMV5 832 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 FAM43BQ6ZT52 329 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 TMCO2Q7Z6W1 182 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 NPAS4Q8IUM7 802 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 TMEM161BQ8NDZ6 487 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ENGASEQ8NFI3 743 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 TET1Q8NFU7 2136 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 HPS3Q969F9 1004 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 HVCN1Q96D96 273 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 CCDC51Q96ER9 411 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ACCSQ96QU6 501 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 YME1L1Q96TA2 773 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 NTPCRQ9BSD7 190 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 TARS2Q9BW92 718 aaKnown RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 TSPYL2Q9H2G4 693 aaPredicted RBP6.93□□□□□ -1.3
LTBR-212ENST00000543542 FZD8Q9H461 694 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 OLFML3Q9NRN5 406 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 LMBRD1Q9NUN5 540 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 FAM105AQ9NUU6 356 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ARHGAP28Q9P2N2 729 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 ANKFY1Q9P2R3 1169 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 PARP2Q9UGN5 583 aa6.93□□□□□ -1.3
LTBR-212ENST00000543542 MSRAQ9UJ68 235 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms