RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 NRDE2Q9H7Z3 1164 aa20.65■□□□□ 0.9
TMED3-204ENST00000543455 SPG21Q9NZD8 308 aa20.65■□□□□ 0.9
TMED3-204ENST00000543455 CLEC1BQ9P126 229 aa20.65■□□□□ 0.9
TMED3-204ENST00000543455 ERLIN2O94905 339 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 MUTP22033 750 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 CCT6AP40227 531 aaKnown RBP20.64■□□□□ 0.89
TMED3-204ENST00000543455 PDIA5Q14554 519 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 PADI6Q6TGC4 694 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 GLB1LQ6UWU2 654 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 FAM178BQ8IXR5 827 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 MCPH1Q8NEM0 835 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 BCL7CQ8WUZ0 217 aaPredicted RBP20.64■□□□□ 0.89
TMED3-204ENST00000543455 KHSRPQ92945 711 aaKnown RBP eCLIP20.64■□□□□ 0.89
TMED3-204ENST00000543455 MSLNLQ96KJ4 702 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.89
TMED3-204ENST00000543455 PER2O15055 1255 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 ARF4P18085 180 aaPredicted RBP20.63■□□□□ 0.89
TMED3-204ENST00000543455 CYP11B2P19099 503 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
TMED3-204ENST00000543455 CDC25AP30304 524 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 AXLP30530 894 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 PPM1AP35813 382 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 PRPHP41219 470 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 ATP2C1P98194 919 aaPredicted RBP20.63■□□□□ 0.89
TMED3-204ENST00000543455 CUL4AQ13619 759 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 PCBP1Q15365 356 aaKnown RBP eCLIP20.63■□□□□ 0.89
TMED3-204ENST00000543455 CLUL1Q15846 466 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 HAUS3Q68CZ6 603 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 CDCA2Q69YH5 1023 aaPredicted RBP20.63■□□□□ 0.89
TMED3-204ENST00000543455 ZNF280BQ86YH2 543 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 RNF39Q9H2S5 420 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 POLD4Q9HCU8 107 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 DNAJB4Q9UDY4 337 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 SMC3Q9UQE7 1217 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 IPPQ9Y573 584 aa20.63■□□□□ 0.89
TMED3-204ENST00000543455 TTLL13PA6NNM8 815 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 HIDE1A8MVS5 230 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 ZC3H11AO75152 810 aaKnown RBP eCLIP20.62■□□□□ 0.89
TMED3-204ENST00000543455 DUSP6Q16828 381 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 PLPP4Q5VZY2 271 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 CDR2LQ86X02 465 aaPredicted RBP20.62■□□□□ 0.89
TMED3-204ENST00000543455 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 RSPH1Q8WYR4 309 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 PGBD4Q96DM1 585 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 CSRNP2Q9H175 543 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 RSAD1Q9HA92 442 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 KIAA1024Q9UPX6 916 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 HES2Q9Y543 173 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 ARHGEF35A5YM69 484 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 LAD1O00515 517 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 DDHD2O94830 711 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 EDN1P05305 212 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 GALTP07902 379 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 KCNC3Q14003 757 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 PUS10Q3MIT2 529 aaKnown RBP20.62■□□□□ 0.89
TMED3-204ENST00000543455 RILPL1Q5EBL4 403 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 NOTUMQ6P988 496 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 KCNK18Q7Z418 384 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 MICAL1Q8TDZ2 1067 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 PPP2R3CQ969Q6 453 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 TCF25Q9BQ70 676 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 VN1R3Q9BXE9 311 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 BHMT2Q9H2M3 363 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 TLE6Q9H808 572 aa20.62■□□□□ 0.89
TMED3-204ENST00000543455 DDX19AQ9NUU7 478 aaKnown RBP20.62■□□□□ 0.89
TMED3-204ENST00000543455 LRRIQ4A6NIV6 560 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 H3BQV1 296 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 INPPL1O15357 1258 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 MBTPS2O43462 519 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
TMED3-204ENST00000543455 SLC11A1P49279 550 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 PDE12Q6L8Q7 609 aaKnown RBP20.61■□□□□ 0.89
TMED3-204ENST00000543455 PPP4R3CPQ6ZMV5 832 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 CCDC51Q96ER9 411 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 FZD8Q9H461 694 aa20.61■□□□□ 0.89
TMED3-204ENST00000543455 NXF3Q9H4D5 531 aaKnown RBP20.61■□□□□ 0.89
TMED3-204ENST00000543455 BARX2Q9UMQ3 279 aaPredicted RBP20.61■□□□□ 0.89
TMED3-204ENST00000543455 TDRD15B5MCY1 1934 aaKnown RBP20.61■□□□□ 0.89
TMED3-204ENST00000543455 CNTNAP2Q9UHC6 1331 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 E9PMD0 336 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 ALDH7A1P49419 539 aaKnown RBP20.6■□□□□ 0.89
TMED3-204ENST00000543455 NDUFV1P49821 464 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 LARP1BQ659C4 914 aaKnown RBP20.6■□□□□ 0.89
TMED3-204ENST00000543455 IGSF21Q96ID5 467 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 ENTPD7Q9NQZ7 604 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 MIOSQ9NXC5 875 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 PUF60Q9UHX1 559 aaKnown RBP20.6■□□□□ 0.89
TMED3-204ENST00000543455 CD207Q9UJ71 328 aa20.6■□□□□ 0.89
TMED3-204ENST00000543455 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
TMED3-204ENST00000543455 A0A1B0GUA9 196 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 EYA4O95677 639 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 KRT17Q04695 432 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 SMAD2Q15796 467 aaKnown RBP20.59■□□□□ 0.89
TMED3-204ENST00000543455 FAM187BQ17R55 369 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 DTHD1Q6ZMT9 781 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 DAW1Q8N136 415 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 USP20Q9Y2K6 914 aa20.59■□□□□ 0.89
TMED3-204ENST00000543455 POMCP01189 267 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms