RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TMEM143Q96AN5 459 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 SRPK1Q96SB4 655 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 CHCHD3Q9NX63 227 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ADAMTS1Q9UHI8 967 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 FBXL5Q9UKA1 691 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 FARP1Q9Y4F1 1045 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ANGPTL3Q9Y5C1 460 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 MAGED1Q9Y5V3 778 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ZNF609O15014 1411 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 RRN3P2A6NIE6 340 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 KIAA0391O15091 583 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ASAP2O43150 1006 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 HBP1O60381 514 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CIB2O75838 187 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CPP00450 1065 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 INHBAP08476 426 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ZNF16P17020 682 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 SDC4P31431 198 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ATP2C1P98194 919 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CCDC170Q8IYT3 715 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 AFAP1L1Q8TED9 768 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 SH2D3AQ9BRG2 576 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 FBXO28Q9NVF7 368 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 DAAM1Q9Y4D1 1078 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 A6NNZ2 444 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 M0QYV0 167 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 HSPA6P17066 643 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 U2AF2P26368 475 aaKnown RBP eCLIP7.37□□□□□ -1.234e-7■■■■■ 30.7
SRGAP1-206ENST00000543397 INPP5BP32019 993 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 STX2P32856 288 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 SKOR1P84550 965 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 TMEM62Q0P6H9 643 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 THOC5Q13769 683 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 TUBB8Q3ZCM7 444 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CCDC62Q6P9F0 684 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM47EQ6ZV65 393 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 RHOT2Q8IXI1 618 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 RILPQ96NA2 401 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 MAGED2Q9UNF1 606 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 MANSC4A6NHS7 340 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 EFCAB8A8MWE9 144 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 APOEP02649 317 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 PPARGP37231 505 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 RFC5P40937 340 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 KRT31Q15323 416 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ELF2Q15723 593 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 RAPH1Q70E73 1250 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 GDAP1L1Q96MZ0 367 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 JMJD4Q9H9V9 463 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 SMYD2Q9NRG4 433 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 HOMER3Q9NSC5 361 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CALB1P05937 261 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CASP1P29466 404 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 FLT3P36888 993 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 PRKCEQ02156 737 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 DEUP1Q05D60 604 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 KCNH2Q12809 1159 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 MAP7Q14244 749 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 FBXW10Q5XX13 1052 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM83AQ86UY5 434 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 VSIG1Q86XK7 387 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 GUF1Q8N442 669 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 MCUQ8NE86 351 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ACER1Q8TDN7 264 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 IGDCC4Q8TDY8 1250 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 OPTNQ96CV9 577 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 RIT2Q99578 217 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 TRIM62Q9BVG3 475 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 VPS33BQ9H267 617 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ZWILCHQ9H900 591 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 CPA4Q9UI42 421 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 MOSPD1Q9UJG1 213 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 BCL9O00512 1426 aa7.37□□□□□ -1.23
SRGAP1-206ENST00000543397 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PGRMC1O00264 195 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 NDUFAB1O14561 156 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ICAM1P05362 532 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ADORA2BP29275 332 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SNX1Q13596 522 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PASD1Q8IV76 773 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 CCDC13Q8IYE1 715 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 STMN2Q93045 179 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 MXRA8Q9BRK3 442 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 C6orf203Q9P0P8 240 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 JRKLQ9Y4A0 524 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 HGSO14964 777 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 SART1O43290 800 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ECEL1O95672 775 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 RALAP11233 206 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 GUCY1A2P33402 732 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 MAPK9P45984 424 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 EXOSC10Q01780 885 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 KRT33BQ14525 404 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 EMC2Q15006 297 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 PUS10Q3MIT2 529 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 HSPH1Q92598 858 aa7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 GLIS2Q9BZE0 524 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-206ENST00000543397 ASNSD1Q9NWL6 643 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms