RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 NCLP19338 710 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MUTP22033 750 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GJB2P29033 226 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 AXLP30530 894 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PPM1AP35813 382 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 COASYQ13057 564 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GNL2Q13823 731 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TFDP1Q14186 410 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CLUL1Q15846 466 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CDCA2Q69YH5 1023 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GLB1LQ6UWU2 654 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TMEM184AQ6ZMB5 413 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EP400NLQ6ZTU2 488 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ZNF280BQ86YH2 543 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MICAL1Q8TDZ2 1067 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 BCL7CQ8WUZ0 217 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PPP2R3CQ969Q6 453 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CPB2Q96IY4 423 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EIF2AQ9BY44 585 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EPHX3Q9H6B9 360 aa14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NGRNQ9NPE2 291 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-215ENST00000543359 INO80B-WBP1J3KQ70 363 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 DDHD2O94830 711 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CYP11B2P19099 503 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MCM2P49736 904 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ZP2Q05996 745 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PLPP4Q5VZY2 271 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PADI6Q6TGC4 694 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MAEAQ7L5Y9 396 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GJD3Q8N144 294 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MCPH1Q8NEM0 835 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 BSNDQ8WZ55 320 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CCDC51Q96ER9 411 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TCF25Q9BQ70 676 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 VN1R3Q9BXE9 311 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CSRNP2Q9H175 543 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 FZD8Q9H461 694 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 RSAD1Q9HA92 442 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 DNAJB4Q9UDY4 337 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 LRWD1Q9UFC0 647 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PRKAG3Q9UGI9 489 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PUF60Q9UHX1 559 aaKnown RBP14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CD207Q9UJ71 328 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 IPPQ9Y573 584 aa14.55□□□□□ -0.08
TNFRSF1A-215ENST00000543359 A0A1B0GUA9 196 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 TTLL13PA6NNM8 815 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 B4GALT5O43286 388 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PRPHP41219 470 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SLC11A1P49279 550 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ALDH7A1P49419 539 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NDUFV1P49821 464 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 KRT17Q04695 432 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 NOTUMQ6P988 496 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MRPL43Q8N983 215 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 SMRP1Q8NCR6 262 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 IGSF21Q96ID5 467 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CDCA3Q99618 268 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 MIOSQ9NXC5 875 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 KIAA1024Q9UPX6 916 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 INPP5FQ9Y2H2 1132 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CNTNAP2Q9UHC6 1331 aa14.54□□□□□ -0.08
TNFRSF1A-215ENST00000543359 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 PP2D1A8MPX8 630 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 LAD1O00515 517 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ZC3H11AO75152 810 aaKnown RBP eCLIP14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ERLIN2O94905 339 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 EDN1P05305 212 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CCT6AP40227 531 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 FAM187BQ17R55 369 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 HAUS3Q68CZ6 603 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ADHFE1Q8IWW8 467 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 CNNM3Q8NE01 707 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 GSTCDQ8NEC7 633 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ZBP1Q9H171 429 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 S1PR5Q9H228 398 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 POLD4Q9HCU8 107 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 C11orf16Q9NQ32 467 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ENTPD7Q9NQZ7 604 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 FAM50BQ9Y247 325 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 HES2Q9Y543 173 aa14.53□□□□□ -0.08
TNFRSF1A-215ENST00000543359 WDFY4Q6ZS81 3184 aa14.52□□□□□ -0.08
TNFRSF1A-215ENST00000543359 ARHGEF35A5YM69 484 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ARL5CA6NH57 179 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 PI4K2BG5E9Z4 385 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 EFEMP2O95967 443 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 ITGA4P13612 1032 aa14.52□□□□□ -0.09
TNFRSF1A-215ENST00000543359 CDC25AP30304 524 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms