RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FAM209BQ5JX69 171 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 HYIQ5T013 277 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 STEAP3Q658P3 488 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 CYP4F22Q6NT55 531 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 MZT2AQ6P582 158 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 APOA5Q6Q788 366 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 COL23A1Q86Y22 540 aaPredicted RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 RBM12BQ8IXT5 1001 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 NRG4Q8WWG1 115 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 UBE2FQ969M7 185 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 RGMAQ96B86 450 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 HSPA12BQ96MM6 686 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 EIF2AK1Q9BQI3 630 aaKnown RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 C22orf23Q9BZE7 217 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 LRRC27Q9C0I9 530 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 JADE2Q9NQC1 790 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 STARD7Q9NQZ5 370 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 RRN3Q9NYV6 651 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 TMPRSS11EQ9UL52 423 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 CTNND2Q9UQB3 1225 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 TELO2Q9Y4R8 837 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 NR2E3Q9Y5X4 410 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 SLC4A7Q9Y6M7 1214 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 NUMBLQ9Y6R0 609 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF608Q9ULD9 1512 aaPredicted RBP4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 PITPNM2Q9BZ72 1349 aa4.71□□□□□ -1.66
SFSWAP-211ENST00000542813 M0R3H8 397 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FOXN3O00409 490 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 EXOC5O00471 708 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FRS3O43559 492 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TIMM44O43615 452 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF500O60304 480 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 RHOBTB3O94955 611 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TSPAN15O95858 294 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FTLP02792 175 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 MMEP08473 750 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 RPL17P18621 184 aaKnown RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TNFAIP3P21580 790 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TECP42680 631 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 AFMP43652 599 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 STT3AP46977 705 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 RAP1GAPP47736 663 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 MAP2K6P52564 334 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 RAB1AP62820 205 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 EGR3Q06889 387 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF543Q08ER8 600 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 MALLQ13021 153 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 PPFIA1Q13136 1202 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TBX2Q13207 712 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 KCTD2Q14681 263 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 CHRNA2Q15822 529 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 EMC4Q5J8M3 183 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 DACT2Q5SW24 774 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 PRAMEF9Q5VWM5 478 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 KIAA1841Q6NSI8 718 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 KLHDC10Q6PID8 442 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 LMBR1LQ6UX01 489 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TMPRSS7Q7RTY8 843 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 MAATS1Q7Z4T9 603 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 RTN4RL1Q86UN2 441 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 CREG2Q8IUH2 290 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FAM9BQ8IZU0 186 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 PDILTQ8N807 584 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 HIPK4Q8NE63 616 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 IL17REQ8NFR9 667 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 ASB15Q8WXK1 588 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 ARL8AQ96BM9 186 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FOXRED1Q96CU9 486 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 APIPQ96GX9 242 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 CDK5RAP3Q96JB5 506 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 NEUROD6Q96NK8 337 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TOX2Q96NM4 488 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 GBP4Q96PP9 640 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 PPP1R16BQ96T49 567 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 LMCD1Q9NZU5 365 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 FBXO2Q9UK22 296 aaPredicted RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 TPCN1Q9ULQ1 816 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 ASB1Q9Y576 335 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 PCDHGB2Q9Y5G2 931 aa4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 LRRFIP2Q9Y608 721 aaKnown RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 CFAP20Q9Y6A4 193 aaKnown RBP4.7□□□□□ -1.66
SFSWAP-211ENST00000542813 A0A088AWK7 358 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 POM121BA6NF01 834 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 RNASEH2AO75792 299 aaKnown RBP4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 PRLP01236 227 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 PFKMP08237 780 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 WASP42768 502 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 CORO7P57737 925 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 HERVK_113P62684 666 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 PPARAQ07869 468 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ADCY2Q08462 1091 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 IL10RAQ13651 578 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 MYBPC3Q14896 1274 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ADRM1Q16186 407 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 ZNF280DQ6N043 979 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 MIGA2Q7L4E1 593 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 CILP2Q8IUL8 1156 aa4.69□□□□□ -1.66
SFSWAP-211ENST00000542813 LYSMD2Q8IV50 215 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms