RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ANKRD20A3Q5VUR7 823 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 DAB2IPQ5VWQ8 1189 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 SPATA1Q5VX52 437 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ATL3Q6DD88 541 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 TWF2Q6IBS0 349 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CCBE1Q6UXH8 406 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ADAMTSL4Q6UY14 1074 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 FAM196AQ6ZSG2 479 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 BEND5Q7L4P6 421 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 PPP1R42Q7Z4L9 355 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 C11orf96Q7Z7L8 435 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 NLRP14Q86W24 1093 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 MCF2L2Q86YR7 1114 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 WFDC8Q8IUA0 241 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 MAP4K3Q8IVH8 894 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CD302Q8IX05 232 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 SPARTQ8N0X7 666 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CLASRPQ8N2M8 674 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ZGPATQ8N5A5 531 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ANKS4BQ8N8V4 417 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CNBD1Q8NA66 436 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 PANK1Q8TE04 598 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 PMM1Q92871 262 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 LENG1Q96BZ8 264 aaPredicted RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 MED30Q96HR3 178 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ANKRD36BP1Q96IX9 119 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 C8orf48Q96LL4 319 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CCDC42Q96M95 316 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 PRPF18Q99633 342 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 NAP1L4Q99733 375 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 UQCC2Q9BRT2 126 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 CENPKQ9BS16 269 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 HGH1Q9BTY7 390 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 LRRC3Q9BY71 257 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 UNKQ9C0B0 810 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 LNPKQ9C0E8 428 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 VPS16Q9H269 839 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 C12orf10Q9HB07 376 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ATP8A2Q9NTI2 1148 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 ATPIF1Q9UII2 106 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 FAM32AQ9Y421 112 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 NUMBLQ9Y6R0 609 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 NOS1P29475 1434 aa4.69□□□□□ -1.66
SNHG1-219ENST00000542112 PDS5AQ29RF7 1337 aaKnown RBP4.69□□□□□ -1.66
SNHG1-219ENST00000542112 TMEM131LA2VDJ0 1609 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PLEKHG1Q9ULL1 1385 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 KANSL1LA0AUZ9 987 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MAGEA13PA6NCF6 341 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 BOLA2-SMG1P6H3BVE0 249 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 M0R082 166 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SOX1O00570 391 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 OIP5O43482 229 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SLC26A4O43511 780 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 STX6O43752 255 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 N4BP1O75113 896 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 HIP1RO75146 1068 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 LCA5LO95447 670 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 YEATS4O95619 227 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 KRT6AP02538 564 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 KRT6BP04259 564 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CYP11A1P05108 521 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SSBP05455 408 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ZFYP08048 801 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 GNAI3P08754 354 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PAEPP09466 180 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SLURP2P0DP57 97 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CYP2C9P11712 490 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 EIF2S2P20042 333 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SP100P23497 879 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 IL4RP24394 825 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 TNFRSF8P28908 595 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CASP14P31944 242 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 LSP1P33241 339 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SKIV2L2P42285 1042 aaKnown RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 BAG6P46379 1132 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SOX9P48436 509 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 POLE2P56282 527 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 GNG11P61952 73 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MECOMQ03112 1051 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 RBL2Q08999 1139 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 C19orf57Q0VDD7 668 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 NMIQ13287 307 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SAFB2Q14151 953 aaKnown RBP eCLIP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MPP2Q14168 576 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 ITIH4Q14624 930 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 MAPRE2Q15555 327 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 PTGISQ16647 500 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CFAP58Q5T655 872 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 GKAP1Q5VSY0 366 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-219ENST00000542112 C8orf74Q6P047 294 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CCDC62Q6P9F0 684 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 EMBQ6PCB8 327 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 TTC23LQ6PF05 361 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 LVRNQ6Q4G3 990 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CHSY3Q70JA7 882 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 SLITRK4Q8IW52 837 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 RHOT2Q8IXI1 618 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CACNA2D3Q8IZS8 1091 aa4.68□□□□□ -1.66
SNHG1-219ENST00000542112 CCDC63Q8NA47 563 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms