RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TBC1D12O60347 775 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 GHRP10912 638 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 LRRC63Q05C16 580 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 GRM1Q13255 1194 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 GJB7Q6PEY0 223 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 CCDC50Q8IVM0 306 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 SCYL3Q8IZE3 742 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 DAGLBQ8NCG7 672 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 ACTRT1Q8TDG2 376 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 GLG1Q92896 1179 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 RNF25Q96BH1 459 aaPredicted RBP9.87□□□□□ -0.83
THBS3-211ENST00000541990 SPDL1Q96EA4 605 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 CALML4Q96GE6 196 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
THBS3-211ENST00000541990 AZI2Q9H6S1 392 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 KIF9Q9HAQ2 790 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 TRIM33Q9UPN9 1127 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 TELO2Q9Y4R8 837 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 ZNF536O15090 1300 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 UBOX5O94941 541 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 ALDH5A1P51649 535 aaPredicted RBP9.87□□□□□ -0.83
THBS3-211ENST00000541990 AMPD3Q01432 767 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 SP4Q02446 784 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 CYP4A11Q02928 519 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 COASYQ13057 564 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 AADACL2Q6P093 401 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 IRF2BP2Q7Z5L9 587 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 TPCN2Q8NHX9 752 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 LMBR1Q8WVP7 490 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 HAS1Q92839 578 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 KCNMB3Q9NPA1 279 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 OSGEPQ9NPF4 335 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 DDX25Q9UHL0 483 aaKnown RBP9.87□□□□□ -0.83
THBS3-211ENST00000541990 C15orf41Q9Y2V0 281 aa9.87□□□□□ -0.83
THBS3-211ENST00000541990 LAD1O00515 517 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 MYBL1P10243 752 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 GCKP35557 465 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 BACE1P56817 501 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 POU5F1Q01860 360 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 ZNF211Q13398 564 aaPredicted RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 MKRN4PQ13434 485 aaPredicted RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 LRRC14Q15048 493 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 CALCRLQ16602 461 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 DCAF12L1Q5VU92 463 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 GADL1Q6ZQY3 521 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 CEP120Q8N960 986 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 RAD54LQ92698 747 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 CDCA5Q96FF9 252 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 L3MBTL3Q96JM7 780 aaPredicted RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 TXLNGYQ9BZA5 131 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 BMP2KQ9NSY1 1161 aaPredicted RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 SNCAIPQ9Y6H5 919 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 ABCB11O95342 1321 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 IGSF9BQ9UPX0 1349 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 ENO4A6NNW6 628 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 NCALDP61601 193 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 FSTL1Q12841 308 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 GRIK3Q13003 919 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 DPY19L2P1Q6NXN4 242 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 KRT25Q7Z3Z0 450 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 PIGWQ7Z7B1 504 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 DAAM2Q86T65 1068 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 ERICH1Q86X53 443 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 TRIM59Q8IWR1 403 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 MYOCDQ8IZQ8 938 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 EPS8L3Q8TE67 593 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 SNX29Q8TEQ0 813 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 DNAJC19Q96DA6 116 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 MLXIPLQ9NP71 852 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 NAGPAQ9UK23 515 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.86□□□□□ -0.83
THBS3-211ENST00000541990 HTTP42858 3142 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 SPDYE3A6NKU9 549 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 FGGP02679 453 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 RARAP10276 462 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 PPP1R2P41236 205 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 ARHGAP4P98171 946 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 FKBP3Q00688 224 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 MAP3K10Q02779 954 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 MTMR3Q13615 1198 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 ALKBH5Q6P6C2 394 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 PEX26Q7Z412 305 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 APOBEC3FQ8IUX4 373 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 MAB21L3Q8N8X9 362 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.86□□□□□ -0.83
THBS3-211ENST00000541990 MGARPQ8TDB4 240 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 RSRC1Q96IZ7 334 aaKnown RBP9.86□□□□□ -0.83
THBS3-211ENST00000541990 FMO2Q99518 471 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 TSG101Q99816 390 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 AIPL1Q9NZN9 384 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 PNMA3Q9UL41 463 aa9.86□□□□□ -0.83
THBS3-211ENST00000541990 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
THBS3-211ENST00000541990 MYCLP12524 364 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms