RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 PPP2R3BQ9Y5P8 575 aa6.34□□□□□ -1.39
RAP1B-226ENST00000541968 CLEC2LP0C7M8 214 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 GNAT2P19087 354 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 RABGGTBP53611 331 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 PPARAQ07869 468 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 MGAT5Q09328 741 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 ATP13A4Q4VNC1 1196 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 ZNF662Q6ZS27 426 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 OR5M3Q8NGP4 307 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 ZNF483Q8TF39 744 aaPredicted RBP6.33□□□□□ -1.4
RAP1B-226ENST00000541968 NEU4Q8WWR8 484 aaPredicted RBP6.33□□□□□ -1.4
RAP1B-226ENST00000541968 USP7Q93009 1102 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 FDXACB1Q9BRP7 624 aaPredicted RBP6.33□□□□□ -1.4
RAP1B-226ENST00000541968 KCNG1Q9UIX4 513 aa6.33□□□□□ -1.4
RAP1B-226ENST00000541968 NOC2LQ9Y3T9 749 aaKnown RBP6.33□□□□□ -1.4
RAP1B-226ENST00000541968 XDHP47989 1333 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 NRP1O14786 923 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 NRP2O60462 931 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 IPO13O94829 963 aaKnown RBP6.32□□□□□ -1.4
RAP1B-226ENST00000541968 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
RAP1B-226ENST00000541968 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
RAP1B-226ENST00000541968 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 CCDC62Q6P9F0 684 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 LMBR1LQ6UX01 489 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 MDGA1Q8NFP4 955 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 ST8SIA2Q92186 375 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 MNTQ99583 582 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 TRIM8Q9BZR9 551 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 TMPRSS11EQ9UL52 423 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 MAPRE3Q9UPY8 281 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 NUMBLQ9Y6R0 609 aa6.32□□□□□ -1.4
RAP1B-226ENST00000541968 KLRG2A4D1S0 409 aaPredicted RBP6.31□□□□□ -1.4
RAP1B-226ENST00000541968 GOLGA6L6A8MZA4 724 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 SUV39H1O43463 412 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 FAM20BO75063 409 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 RPS6KA4O75676 772 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 CFBP00751 764 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 ADH4P08319 380 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 HK1P19367 917 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 MAKP20794 623 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 CASRP41180 1078 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 GPR15P49685 360 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 NRG3P56975 720 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 SLC25A3Q00325 362 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 MSL3Q8N5Y2 521 aaKnown RBP6.31□□□□□ -1.4
RAP1B-226ENST00000541968 CLIP3Q96DZ5 547 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 PRSS50Q9UI38 385 aa6.31□□□□□ -1.4
RAP1B-226ENST00000541968 HOXA3O43365 443 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-226ENST00000541968 LPLP06858 475 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 ID4P47928 161 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 TGFB2P61812 414 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 TOB2Q14106 344 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-226ENST00000541968 TRIM25Q14258 630 aaKnown RBP6.3□□□□□ -1.4
RAP1B-226ENST00000541968 CCDC178Q5BJE1 867 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 CT83Q5H943 113 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 TAF7LQ5H9L4 462 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 RASSF3Q86WH2 238 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 LYSMD2Q8IV50 215 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 UBR7Q8N806 425 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-226ENST00000541968 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 PRDM12Q9H4Q4 367 aa6.3□□□□□ -1.4
RAP1B-226ENST00000541968 EVLQ9UI08 416 aaPredicted RBP6.3□□□□□ -1.4
RAP1B-226ENST00000541968 A0A1W2PR48 441 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 NEMP1O14524 444 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 BPIP17213 487 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 STRN3Q13033 797 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 UBE3CQ15386 1083 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 DHCR24Q15392 516 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 DDX46Q7L014 1031 aaKnown RBP6.29□□□□□ -1.4
RAP1B-226ENST00000541968 HDGFL2Q7Z4V5 671 aaPredicted RBP6.29□□□□□ -1.4
RAP1B-226ENST00000541968 APBB1IPQ7Z5R6 666 aaPredicted RBP6.29□□□□□ -1.4
RAP1B-226ENST00000541968 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 LARP4BQ92615 738 aaKnown RBP6.29□□□□□ -1.4
RAP1B-226ENST00000541968 WNT8AQ9H1J5 351 aa6.29□□□□□ -1.4
RAP1B-226ENST00000541968 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.28□□□□□ -1.4
RAP1B-226ENST00000541968 TLDC2A0PJX2 215 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 DUSP2Q05923 314 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 PDCD1Q15116 288 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 RABL3Q5HYI8 236 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 PITRM1Q5JRX3 1037 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 RNF180Q86T96 592 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 SLC41A1Q8IVJ1 513 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 OR14C36Q8NHC7 312 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 RSAD2Q8WXG1 361 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 IL17RAQ96F46 866 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 TTC1Q99614 292 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 NRDE2Q9H7Z3 1164 aa6.28□□□□□ -1.4
RAP1B-226ENST00000541968 TOPORSQ9NS56 1045 aaPredicted RBP6.28□□□□□ -1.4
RAP1B-226ENST00000541968 PRAMEF4O60810 478 aa6.27□□□□□ -1.41
RAP1B-226ENST00000541968 PEX11BO96011 259 aa6.27□□□□□ -1.41
RAP1B-226ENST00000541968 LGALS4P56470 323 aa6.27□□□□□ -1.41
RAP1B-226ENST00000541968 MRPL49Q13405 166 aaKnown RBP6.27□□□□□ -1.41
RAP1B-226ENST00000541968 DCAF17Q5H9S7 520 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms