RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 DPY19L2P1Q6NXN4 242 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 NOP9Q86U38 636 aaKnown RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 CHURC1Q8WUH1 139 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 KAT2BQ92831 832 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 ZBTB45Q96K62 511 aaPredicted RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 CEP170P1Q96L14 293 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 LBHD1Q9BQE6 289 aaPredicted RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 IDI2Q9BXS1 227 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 SEMA4AQ9H3S1 761 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 METTL14Q9HCE5 456 aaKnown RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 PITPNM2Q9BZ72 1349 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 PYGMP11217 842 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 FERP16591 822 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 CYP3A7P24462 503 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 MXI1P50539 228 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 ZKSCAN8Q15776 578 aaPredicted RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 ARHGEF16Q5VV41 709 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 SWSAP1Q6NVH7 229 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 EPS8L3Q8TE67 593 aaKnown RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 ERLIN2O94905 339 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 DPEP1P16444 411 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 TNNI1P19237 187 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 MARK3P27448 753 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 ZNF844Q08AG5 666 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 SPRED3Q2MJR0 410 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 CCT8L2Q96SF2 557 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 GABBR1Q9UBS5 961 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
VARS2-211ENST00000541562 DAAM1Q9Y4D1 1078 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 SCN9AQ15858 1988 aa16.21■□□□□ 0.19
VARS2-211ENST00000541562 CREB1P16220 341 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 PPP1R7Q15435 360 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 CPLX4Q7Z7G2 160 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 ATP6V1G3Q96LB4 118 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 CEP89Q96ST8 783 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 AZI2Q9H6S1 392 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 VCPKMTQ9H867 229 aa16.21■□□□□ 0.18
VARS2-211ENST00000541562 LARSQ9P2J5 1176 aaKnown RBP16.21■□□□□ 0.18
VARS2-211ENST00000541562 SEPT9Q9UHD8 586 aaPredicted RBP16.21■□□□□ 0.18
VARS2-211ENST00000541562 CD58P19256 250 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 MNAT1P51948 309 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 ZDHHC14Q8IZN3 488 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 CRYGNQ8WXF5 182 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 NUP85Q9BW27 656 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 CTNNAL1Q9UBT7 734 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 TTC7AQ9ULT0 858 aaPredicted RBP16.2■□□□□ 0.18
VARS2-211ENST00000541562 FRMD3A2A2Y4 597 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 PIK3R2O00459 728 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 YY1P25490 414 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 SLC29A2Q14542 456 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 GDAP1Q8TB36 358 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 FIZ1Q96SL8 496 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 FMO2Q99518 471 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 MTFR1LQ9H019 292 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 RNF19AQ9NV58 838 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 SERPINA10Q9UK55 444 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 FSTL1Q12841 308 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 LONRF1Q17RB8 773 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 DDX23Q9BUQ8 820 aaKnown RBP16.2■□□□□ 0.18
VARS2-211ENST00000541562 STK33Q9BYT3 514 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 GPR88Q9GZN0 384 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 KCNK9Q9NPC2 374 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 ASIC3Q9UHC3 531 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 TMX2Q9Y320 296 aa16.2■□□□□ 0.18
VARS2-211ENST00000541562 PRLRP16471 622 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 ECHS1P30084 290 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 HMGCS2P54868 508 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 SMAD1Q15797 465 aaKnown RBP16.19■□□□□ 0.18
VARS2-211ENST00000541562 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 ZBTB33Q86T24 672 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 IPO4Q8TEX9 1081 aaKnown RBP16.19■□□□□ 0.18
VARS2-211ENST00000541562 BSNDQ8WZ55 320 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 MXRA8Q9BRK3 442 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 TMEM117Q9H0C3 514 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 WNT10BO00744 389 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 VIMP08670 466 aaKnown RBP16.19■□□□□ 0.18
VARS2-211ENST00000541562 CAP2P40123 477 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 RARRES1P49788 294 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 ACTN3Q08043 901 aaPredicted RBP16.19■□□□□ 0.18
VARS2-211ENST00000541562 MAPK7Q13164 816 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 ATP13A4Q4VNC1 1196 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 COBLL1Q53SF7 1204 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 PLIN4Q96Q06 1357 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 TCHPQ9BT92 498 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
VARS2-211ENST00000541562 GOLGA6L7A0A1B0GV03 622 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 ORC2Q13416 577 aaPredicted RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 NBPF12Q5TAG4 269 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms