RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 CLSTN1O94985 981 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 NR3C1P04150 777 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 SFNP31947 248 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 LSP1P33241 339 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 ERVK-9P63128 1117 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 TTLL12Q14166 644 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-227ENST00000541342 TRMT1LQ7Z2T5 733 aaKnown RBP18.62■□□□□ 0.57
SPIDR-227ENST00000541342 C4orf19Q8IY42 314 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 SCN4AP35499 1836 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 MAFGO15525 162 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 ERLIN2O94905 339 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 PSMC5P62195 406 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 ZNF571Q7Z3V5 609 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-227ENST00000541342 STRA6Q9BX79 667 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 MOV10L1Q9BXT6 1211 aaKnown RBP18.62■□□□□ 0.57
SPIDR-227ENST00000541342 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 BACH1O14867 736 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 CASP4P49662 377 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 MOGSQ13724 837 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 ZNF746Q6NUN9 644 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-227ENST00000541342 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 LRRC57Q8N9N7 239 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 SENP7Q9BQF6 1050 aa18.62■□□□□ 0.57
SPIDR-227ENST00000541342 NDUFAB1O14561 156 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 NF2P35240 595 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 EAPPQ56P03 285 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-227ENST00000541342 PLA2G4FQ68DD2 849 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 ANKRD35Q8N283 1001 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 ASCC2Q9H1I8 757 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-227ENST00000541342 KCNH4Q9UQ05 1017 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 ZEB2O60315 1214 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 CNMDO75829 334 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 HSPA9P38646 679 aaKnown RBP18.61■□□□□ 0.57
SPIDR-227ENST00000541342 KLHL7Q8IXQ5 586 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 WHAMMQ8TF30 809 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 MAF1Q9H063 256 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 SPATC1LQ9H0A9 340 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
SPIDR-227ENST00000541342 ARID2Q68CP9 1835 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 BTNL10A8MVZ5 291 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 CXCL11O14625 94 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 PPP1R37O75864 691 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 SLC9A1P19634 815 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 NR1D1P20393 614 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 SP2Q02086 613 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 ASIC2Q16515 512 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 KCNV1Q6PIU1 500 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 FRMD5Q7Z6J6 570 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 PCDHA10Q9Y5I2 948 aa18.61■□□□□ 0.57
SPIDR-227ENST00000541342 SPATA31C2B4DYI2 1134 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 BHMG1C9JSJ3 638 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-227ENST00000541342 SORBS3O60504 671 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 NPEPPSP55786 919 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 PTPROQ16827 1216 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 ATP6V1G3Q96LB4 118 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 LUC7LQ9NQ29 371 aaKnown RBP18.6■□□□□ 0.57
SPIDR-227ENST00000541342 TCEAL9Q9UHQ7 104 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 KCNK3O14649 394 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 PPIL2Q13356 520 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 UAP1Q16222 522 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-227ENST00000541342 FBXW10Q5XX13 1052 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 ANO5Q75V66 913 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 IPO4Q8TEX9 1081 aaKnown RBP18.6■□□□□ 0.57
SPIDR-227ENST00000541342 SCFD2Q8WU76 684 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 EPN3Q9H201 632 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 AJAP1Q9UKB5 411 aaPredicted RBP18.6■□□□□ 0.57
SPIDR-227ENST00000541342 PLAAQ9Y263 795 aa18.6■□□□□ 0.57
SPIDR-227ENST00000541342 H0YGN5 161 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 IRX3P78415 501 aaPredicted RBP18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NAA35Q5VZE5 725 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 C1orf131Q8NDD1 294 aaKnown RBP18.59■□□□□ 0.57
SPIDR-227ENST00000541342 DNERQ8NFT8 737 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 RDM1Q8NG50 284 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 PAGR1Q9BTK6 254 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NEUROG2Q9H2A3 272 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 ARMCX3Q9UH62 379 aaPredicted RBP18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NFS1Q9Y697 457 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 UBE4BO95155 1302 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 ATXN2Q99700 1313 aaKnown RBP18.59■□□□□ 0.57
SPIDR-227ENST00000541342 A6NNZ2 444 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 ZNF862O60290 1169 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 STAM2O75886 525 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 KIF4AO95239 1232 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 TUBB8Q3ZCM7 444 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 IWS1Q96ST2 819 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 JPH1Q9HDC5 661 aaPredicted RBP18.59■□□□□ 0.57
SPIDR-227ENST00000541342 GPRC5CQ9NQ84 441 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NENFQ9UMX5 172 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 AGTPBP1Q9UPW5 1226 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NFASCO94856 1347 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 LRRC37A2A6NM11 1700 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 CES2O00748 559 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 UCHL3P15374 230 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 PTGISQ16647 500 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 BORCS6Q96GS4 357 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 ISCUQ9H1K1 167 aa18.59■□□□□ 0.57
SPIDR-227ENST00000541342 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms