RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CDY2AQ9Y6F7 541 aa8.36□□□□□ -1.07
YBX3-210ENST00000540975 UBE3CQ15386 1083 aa8.35□□□□□ -1.07
YBX3-210ENST00000540975 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.35□□□□□ -1.07
YBX3-210ENST00000540975 GGNQ86UU5 652 aa8.35□□□□□ -1.07
YBX3-210ENST00000540975 GLB1L2Q8IW92 636 aa8.35□□□□□ -1.07
YBX3-210ENST00000540975 ZNF808Q8N4W9 903 aaPredicted RBP8.35□□□□□ -1.07
YBX3-210ENST00000540975 HHEXQ03014 270 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 SPTY2D1Q68D10 685 aaPredicted RBP8.34□□□□□ -1.07
YBX3-210ENST00000540975 DBX2Q6ZNG2 339 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 SGMS1Q86VZ5 419 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 KRTAP4-9Q9BYQ8 210 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 DPP7Q9UHL4 492 aa8.34□□□□□ -1.07
YBX3-210ENST00000540975 PLSCR1O15162 318 aa8.33□□□□□ -1.08
YBX3-210ENST00000540975 HIBADHP31937 336 aaKnown RBP8.33□□□□□ -1.08
YBX3-210ENST00000540975 GPR3P46089 330 aa8.33□□□□□ -1.08
YBX3-210ENST00000540975 NPEPPSP55786 919 aa8.33□□□□□ -1.08
YBX3-210ENST00000540975 MRPS9P82933 396 aaKnown RBP8.33□□□□□ -1.08
YBX3-210ENST00000540975 AMPD3Q01432 767 aa8.33□□□□□ -1.08
YBX3-210ENST00000540975 SPIDRQ14159 915 aa8.33□□□□□ -1.08
YBX3-210ENST00000540975 MSL3Q8N5Y2 521 aaKnown RBP8.33□□□□□ -1.08
YBX3-210ENST00000540975 SH3RF3Q8TEJ3 882 aaPredicted RBP8.33□□□□□ -1.08
YBX3-210ENST00000540975 K7ESF4 209 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 LTA4HP09960 611 aaKnown RBP8.32□□□□□ -1.08
YBX3-210ENST00000540975 ERVK-21P61565 698 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 SPDYAQ5MJ70 313 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 SPRED1Q7Z699 444 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 BORCS6Q96GS4 357 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 ENKD1Q9H0I2 346 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 TLR9Q9NR96 1032 aa8.32□□□□□ -1.08
YBX3-210ENST00000540975 CDK17Q00537 523 aa8.31□□□□□ -1.08
YBX3-210ENST00000540975 C19orf54Q5BKX5 351 aa8.31□□□□□ -1.08
YBX3-210ENST00000540975 FKBP15Q5T1M5 1219 aa8.31□□□□□ -1.08
YBX3-210ENST00000540975 ABHD15Q6UXT9 468 aa8.31□□□□□ -1.08
YBX3-210ENST00000540975 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
YBX3-210ENST00000540975 QRSL1Q9H0R6 528 aaKnown RBP8.31□□□□□ -1.08
YBX3-210ENST00000540975 HECAQ9UBI9 543 aaPredicted RBP8.31□□□□□ -1.08
YBX3-210ENST00000540975 CASRP41180 1078 aa8.3□□□□□ -1.08
YBX3-210ENST00000540975 PUM1Q14671 1186 aaKnown RBP eCLIP8.3□□□□□ -1.08
YBX3-210ENST00000540975 THEMISQ8N1K5 641 aaPredicted RBP8.3□□□□□ -1.08
YBX3-210ENST00000540975 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
YBX3-210ENST00000540975 TSPEARQ8WU66 669 aa8.3□□□□□ -1.08
YBX3-210ENST00000540975 ARL8AQ96BM9 186 aa8.3□□□□□ -1.08
YBX3-210ENST00000540975 ZNF512Q96ME7 567 aaPredicted RBP8.3□□□□□ -1.08
YBX3-210ENST00000540975 CAPN14A8MX76 684 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 NRP1O14786 923 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 TMEM127O75204 238 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 STC2O76061 302 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 MTHFD2P13995 350 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 CTSSP25774 331 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 WNT3AP56704 352 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 MEF2AQ02078 507 aaPredicted RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 ELAVL1Q15717 326 aaKnown RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 MUM1Q2TAK8 710 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 TOR2AQ5JU69 321 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 LCE5AQ5TCM9 118 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 NECAB2Q7Z6G3 386 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 GSPT2Q8IYD1 628 aaKnown RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 ANKRD35Q8N283 1001 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 CNTD1Q8N815 330 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 SNX33Q8WV41 574 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 AUTS2Q8WXX7 1259 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 EXTL1Q92935 676 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 MIEF2Q96C03 454 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 PAWRQ96IZ0 340 aaKnown RBP8.29□□□□□ -1.08
YBX3-210ENST00000540975 MENTQ9BUN1 341 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 TRIM8Q9BZR9 551 aa8.29□□□□□ -1.08
YBX3-210ENST00000540975 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
YBX3-210ENST00000540975 MFSD5Q6N075 450 aa8.28□□□□□ -1.08
YBX3-210ENST00000540975 FATE1Q969F0 183 aa8.28□□□□□ -1.08
YBX3-210ENST00000540975 IFT122Q9HBG6 1241 aa8.28□□□□□ -1.08
YBX3-210ENST00000540975 PRAMEF4O60810 478 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 CFBP00751 764 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 CDKN1CP49918 316 aaPredicted RBP8.27□□□□□ -1.09
YBX3-210ENST00000540975 DUSP2Q05923 314 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
YBX3-210ENST00000540975 BTNL9Q6UXG8 535 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 ELOA2Q8IYF1 753 aaPredicted RBP8.27□□□□□ -1.09
YBX3-210ENST00000540975 DNAJC28Q9NX36 388 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 GIT1Q9Y2X7 761 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 WASHC2AQ641Q2 1341 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 RPTORQ8N122 1335 aa8.27□□□□□ -1.09
YBX3-210ENST00000540975 CYP27B1O15528 508 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 MFAP3LO75121 409 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 ACRV1P26436 265 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 GUCY2FP51841 1108 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 CCT2P78371 535 aaKnown RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 KLF1Q13351 362 aaPredicted RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 MRPL49Q13405 166 aaKnown RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 ADRM1Q16186 407 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 INAVAQ3KP66 663 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 NRN1LQ496H8 165 aa8.26□□□□□ -1.09
YBX3-210ENST00000540975 LILRA3Q8N6C8 439 aaPredicted RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 PRPF38AQ8NAV1 312 aaKnown RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 GLB1L3Q8NCI6 653 aaPredicted RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 RIN2Q8WYP3 895 aaPredicted RBP8.26□□□□□ -1.09
YBX3-210ENST00000540975 CCM2LQ9NUG4 571 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms