RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 STK39Q9UEW8 545 aa16.46■□□□□ 0.23
DDX11-217ENST00000540935 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
DDX11-217ENST00000540935 BDP1A6H8Y1 2624 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 INO80B-WBP1J3KQ70 363 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 PER2O15055 1255 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX11-217ENST00000540935 GLP2RO95838 553 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■■□□ 17.2
DDX11-217ENST00000540935 RPA1P27694 616 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 PBX3P40426 434 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 RNASELQ05823 741 aaKnown RBP16.45■□□□□ 0.22
DDX11-217ENST00000540935 SMC1AQ14683 1233 aaKnown RBP16.45■□□□□ 0.22
DDX11-217ENST00000540935 ZNF174Q15697 407 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 HAUS3Q68CZ6 603 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 MCPH1Q8NEM0 835 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 RSAD1Q9HA92 442 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 INPP5FQ9Y2H2 1132 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 STK24Q9Y6E0 443 aa16.45■□□□□ 0.22
DDX11-217ENST00000540935 TSPAN1O60635 241 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 GPR37L1O60883 481 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
DDX11-217ENST00000540935 COL9A1P20849 921 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 CAPSQ13938 189 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 GIT2Q14161 759 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 LONRF3Q496Y0 759 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 UBXN11Q5T124 520 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 AGMOQ6ZNB7 445 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
DDX11-217ENST00000540935 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 POLR3FQ9H1D9 316 aaPredicted RBP16.44■□□□□ 0.22
DDX11-217ENST00000540935 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
DDX11-217ENST00000540935 BARX2Q9UMQ3 279 aaPredicted RBP16.44■□□□□ 0.22
DDX11-217ENST00000540935 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
DDX11-217ENST00000540935 MED24O75448 989 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 GALTP07902 379 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 GLRA2P23416 452 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX11-217ENST00000540935 MBTD1Q05BQ5 628 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 KCNC3Q14003 757 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 DDX53Q86TM3 631 aaKnown RBP16.43■□□□□ 0.22
DDX11-217ENST00000540935 HACE1Q8IYU2 909 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 KHSRPQ92945 711 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX11-217ENST00000540935 IGSF21Q96ID5 467 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
DDX11-217ENST00000540935 RAB34Q9BZG1 259 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 CSRNP2Q9H175 543 aa16.43■□□□□ 0.22
DDX11-217ENST00000540935 C2orf71A6NGG8 1288 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 HIDE1A8MVS5 230 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 LAD1O00515 517 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 ITGA4P13612 1032 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 HOXB8P17481 243 aaPredicted RBP16.42■□□□□ 0.22
DDX11-217ENST00000540935 MCM2P49736 904 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 PDIA5Q14554 519 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 CASP10Q92851 521 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 PRIMPOLQ96LW4 560 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 TMEM175Q9BSA9 504 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
DDX11-217ENST00000540935 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
DDX11-217ENST00000540935 IPPQ9Y573 584 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 IRAK3Q9Y616 596 aa16.42■□□□□ 0.22
DDX11-217ENST00000540935 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 LRRIQ4A6NIV6 560 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 INPPL1O15357 1258 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 DCXO43602 365 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 ALDH2P05091 517 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 ANKRD54Q6NXT1 300 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 ZBTB8OSQ8IWT0 167 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 TMEM87AQ8NBN3 555 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 SMG8Q8ND04 991 aaKnown RBP16.41■□□□□ 0.22
DDX11-217ENST00000540935 VN1R2Q8NFZ6 395 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 LRFN3Q9BTN0 628 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 ZBP1Q9H171 429 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 C2orf40Q9H1Z8 148 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 PRMT7Q9NVM4 692 aaPredicted RBP16.41■□□□□ 0.22
DDX11-217ENST00000540935 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
DDX11-217ENST00000540935 USP15Q9Y4E8 981 aaPredicted RBP16.41■□□□□ 0.22
DDX11-217ENST00000540935 A0A087WWV3 80 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 CXCL14O95715 111 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 CTSAP10619 480 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
DDX11-217ENST00000540935 CYP11B2P19099 503 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 CA8P35219 290 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
DDX11-217ENST00000540935 SLC11A1P49279 550 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 AMHR2Q16671 573 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
DDX11-217ENST00000540935 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms