RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 STARD3Q14849 445 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 PDCD1Q15116 288 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 NBPF9Q3BBW0 867 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 FRMD7Q6ZUT3 714 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 SYTL1Q8IYJ3 562 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 CACNA2D3Q8IZS8 1091 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 FIBCD1Q8N539 461 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 ZNF527Q8NB42 609 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 PCYOX1LQ8NBM8 494 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 BRI3BPQ8WY22 251 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 RSPH1Q8WYR4 309 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 FBXW5Q969U6 566 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 KREMEN1Q96MU8 473 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 LMAN2LQ9H0V9 348 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 PARD6AQ9NPB6 346 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 UBN1Q9NPG3 1134 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 WASH6PQ9NQA3 447 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 ITM2CQ9NQX7 267 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 ANKEF1Q9NU02 776 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 IFT80Q9P2H3 777 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-209ENST00000540819 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
PRKDC-209ENST00000540819 SLC13A4Q9UKG4 626 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 MAGED2Q9UNF1 606 aaPredicted RBP6.26□□□□□ -1.41
PRKDC-209ENST00000540819 SF3B6Q9Y3B4 125 aaKnown RBP6.26□□□□□ -1.41
PRKDC-209ENST00000540819 SSU72P8A0A1W2PR75 194 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 RFXAPO00287 272 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 TOR1BO14657 336 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 MEFVO15553 781 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 IRAK2O43187 625 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 KDM1AO60341 852 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 SKAP2O75563 359 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 MTA2O94776 668 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 KRT20P35900 424 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 BUD31P41223 144 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 IL12RB1P42701 662 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 FXR1P51114 621 aaKnown RBP eCLIP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 ALDH6A1Q02252 535 aaKnown RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 SCRN1Q12765 414 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 PRKG1Q13976 671 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 SEPT2Q15019 361 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 ZNF174Q15697 407 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 KIZQ2M2Z5 673 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 UAP1L1Q3KQV9 507 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 GPATCH4Q5T3I0 446 aaKnown RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 TCERG1LQ5VWI1 586 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 SWSAP1Q6NVH7 229 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 NEK10Q6ZWH5 1172 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 FRS2Q8WU20 508 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 TGFBRAP1Q8WUH2 860 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 CENPIQ92674 756 aaPredicted RBP6.25□□□□□ -1.41
PRKDC-209ENST00000540819 RMDN3Q96TC7 470 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 LRFN3Q9BTN0 628 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 BOCQ9BWV1 1114 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 ASPNQ9BXN1 380 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 FBXL21Q9UKT6 434 aa6.25□□□□□ -1.41
PRKDC-209ENST00000540819 FFAR2O15552 330 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 VAMP4O75379 141 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 THP07101 528 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 MYF5P13349 255 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 RPL10P27635 214 aaKnown RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 OAS2P29728 719 aaKnown RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 LTBRP36941 435 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 KRT83P78385 493 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 TEKQ02763 1124 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 SLC14A2Q15849 920 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 CCNG2Q16589 344 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 E4F1Q66K89 784 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 MAEAQ7L5Y9 396 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 TMEM151BQ8IW70 566 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 CISD2Q8N5K1 135 aaKnown RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 NPLOC4Q8TAT6 608 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 ADAMTS18Q8TE60 1221 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 COPS5Q92905 334 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 COA7Q96BR5 231 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 VWCEQ96DN2 955 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 CDHR1Q96JP9 859 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 ZDHHC15Q96MV8 337 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 BARD1Q99728 777 aaKnown RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 TREX2Q9BQ50 279 aaPredicted RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 SGPP1Q9BX95 441 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 NSMCE4AQ9NXX6 385 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 SERPINB13Q9UIV8 391 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 KCNG1Q9UIX4 513 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 ISY1Q9ULR0 285 aaKnown RBP6.24□□□□□ -1.41
PRKDC-209ENST00000540819 CORO2BQ9UQ03 480 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 KCTD3Q9Y597 815 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 PCDHGB2Q9Y5G2 931 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 SNX13Q9Y5W8 968 aa6.24□□□□□ -1.41
PRKDC-209ENST00000540819 OR14I1A6ND48 311 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 F5H0A9 414 aaPredicted RBP6.23□□□□□ -1.41
PRKDC-209ENST00000540819 FRS3O43559 492 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 PSPNO60542 156 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 FGF18O76093 207 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 ALDH2P05091 517 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 THBDP07204 575 aa6.23□□□□□ -1.41
PRKDC-209ENST00000540819 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms