RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TUFT1Q9NNX1 390 aa14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 DBR1Q9UK59 544 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 BARX2Q9UMQ3 279 aaPredicted RBP14.6□□□□□ -0.07
SEMA4D-223ENST00000540475 C2orf71A6NGG8 1288 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 PRR33A8MZF0 331 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 TSPAN1O60635 241 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 HOXB8P17481 243 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 MUTP22033 750 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 TRAPPC10P48553 1259 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 MBTD1Q05BQ5 628 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 HERC4Q5GLZ8 1057 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 PLPP4Q5VZY2 271 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 ANKRD54Q6NXT1 300 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 SYCE2Q6PIF2 218 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 TMC7Q7Z402 723 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 TMEM173Q86WV6 379 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 CATSPER3Q86XQ3 398 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 C4orf32Q8N8J7 132 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 SMG8Q8ND04 991 aaKnown RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 ZBP1Q9H171 429 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 UBN1Q9NPG3 1134 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 ENTPD7Q9NQZ7 604 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 KANSL3Q9P2N6 904 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 STK39Q9UEW8 545 aa14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 USP15Q9Y4E8 981 aaPredicted RBP14.59□□□□□ -0.07
SEMA4D-223ENST00000540475 POTEMA6NI47 508 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 NT5C1B-RDH14C9J2C7 533 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 B4GALT3O60512 393 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 EFEMP2O95967 443 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 CTSAP10619 480 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 GLRA2P23416 452 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 RPA1P27694 616 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 MCM7P33993 719 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 GUCY1B3Q02153 619 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 CAPSQ13938 189 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 GIT2Q14161 759 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 TFDP1Q14186 410 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 ZNF280BQ86YH2 543 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 ASAP3Q8TDY4 903 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 PIGOQ8TEQ8 1089 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 TMEM175Q9BSA9 504 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 PHF7Q9BWX1 381 aaPredicted RBP14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 RSAD1Q9HA92 442 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 RAPGEFL1Q9UHV5 662 aa14.58□□□□□ -0.08
SEMA4D-223ENST00000540475 LILRB3O75022 631 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 ZC3H11AO75152 810 aaKnown RBP eCLIP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 MED24O75448 989 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 DDHD2O94830 711 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 AFF1P51825 1210 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 FOSBP53539 338 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 NOTUMQ6P988 496 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 RNF135Q8IUD6 432 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 BCL7CQ8WUZ0 217 aaPredicted RBP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 NACC1Q96RE7 527 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 VN1R3Q9BXE9 311 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 CSRNP2Q9H175 543 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 BMP2KQ9NSY1 1161 aaPredicted RBP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 DNAJB4Q9UDY4 337 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 IPPQ9Y573 584 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 ZMYM2Q9UBW7 1377 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 TECTAO75443 2155 aa14.57□□□□□ -0.08
SEMA4D-223ENST00000540475 MTCL1Q9Y4B5 1905 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 A0A1B0GUA9 196 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 ERLIN2O94905 339 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 CXCL14O95715 111 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 ALDH2P05091 517 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 OR52Z1P0C646 297 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 TECP42680 631 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 SLC11A1P49279 550 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 PDIA5Q14554 519 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 BMS1Q14692 1282 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 ZNF174Q15697 407 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 FAM187BQ17R55 369 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 LONRF3Q496Y0 759 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 CDCA2Q69YH5 1023 aaPredicted RBP14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 PPP4R3CPQ6ZMV5 832 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 VPS52Q8N1B4 723 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 MCPH1Q8NEM0 835 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 URGCPQ8TCY9 931 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 CASP10Q92851 521 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 EIF2AQ9BY44 585 aaKnown RBP14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 FZD8Q9H461 694 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 HCFC2Q9Y5Z7 792 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 DENND4AQ7Z401 1863 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 MYO10Q9HD67 2058 aa14.56□□□□□ -0.08
SEMA4D-223ENST00000540475 A0A087WWV3 80 aa14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 FAM86C2PA6NEL3 165 aa14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 TOB1P50616 345 aaPredicted RBP14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 RNASELQ05823 741 aaKnown RBP14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 DSC1Q08554 894 aa14.55□□□□□ -0.08
SEMA4D-223ENST00000540475 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms