RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 PGM2Q96G03 612 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 RBM41Q96IZ5 413 aaKnown RBP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 ALG6Q9Y672 507 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 PTENP60484 403 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 COBLL1Q53SF7 1204 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 SYDE2Q5VT97 1194 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 C1orf54Q8WWF1 131 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 PPCSQ9HAB8 311 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 WDR91A4D1P6 747 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 ENO4A6NNW6 628 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 TOM1O60784 492 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 PIK3CAP42336 1068 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 VAMP7P51809 220 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 APTXQ7Z2E3 356 aaKnown RBP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 NME8Q8N427 588 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 MKNK1Q9BUB5 465 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 C15orf41Q9Y2V0 281 aa13.91□□□□□ -0.18
DNMT1-203ENST00000540357 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-203ENST00000540357 BTNL10A8MVZ5 291 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 CREB3O43889 395 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 LIG4P49917 911 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 XXYLT1Q8NBI6 393 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 PIGOQ8TEQ8 1089 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 DNAJC9Q8WXX5 260 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 TBX3O15119 743 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 COILP38432 576 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 SLC1A1P43005 524 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 IZUMO3Q5VZ72 239 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 IRF2BP1Q8IU81 584 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 MAGEC3Q8TD91 643 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 GLG1Q92896 1179 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 ERP27Q96DN0 273 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 REEP2Q9BRK0 252 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 ARFIP2P53365 341 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 FBXO33Q7Z6M2 555 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 DTNBP1Q96EV8 351 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 HARSP12081 509 aaKnown RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 ARL4CP56559 192 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 GRAPQ13588 217 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 SF3B3Q15393 1217 aaKnown RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-203ENST00000540357 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
DNMT1-203ENST00000540357 SPECC1L-ADORA2AF8WAN1 911 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.196e-7■■□□□ 13.8
DNMT1-203ENST00000540357 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 RASA1P20936 1047 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 GCLMP48507 274 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 EPS8L3Q8TE67 593 aaKnown RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 MAGEB18Q96M61 343 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 OLFM3Q96PB7 478 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 TRABDQ9H4I3 376 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 UBE4BO95155 1302 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 SPAG7O75391 227 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 LCA5LO95447 670 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 PRELPP51888 382 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 IL17AQ16552 155 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ZNF572Q7Z3I7 529 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 PDIK1LQ8N165 341 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ATXN2LQ8WWM7 1075 aaKnown RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 NVLO15381 856 aaKnown RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 CCDC22O60826 627 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 PFDN1O60925 122 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 UBOX5O94941 541 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 TRIM49P0CI25 452 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 TRIM49CP0CI26 452 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ABCD1P33897 745 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 SEPT6Q14141 434 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 TTBK2Q6IQ55 1244 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ADGRA1Q86SQ6 560 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 MARK3P27448 753 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 AP2B1P63010 937 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 C16orf86Q6ZW13 317 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 RNF168Q8IYW5 571 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 HAUS1Q96CS2 278 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
DNMT1-203ENST00000540357 RPS6KC1Q96S38 1066 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
DNMT1-203ENST00000540357 SLC37A4O43826 429 aa13.88□□□□□ -0.19
DNMT1-203ENST00000540357 BMP3P12645 472 aa13.88□□□□□ -0.19
DNMT1-203ENST00000540357 CD19P15391 556 aa13.88□□□□□ -0.19
DNMT1-203ENST00000540357 SNX16P57768 344 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms