RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 FRMD5Q7Z6J6 570 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 CCDC170Q8IYT3 715 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 RPUSD2Q8IZ73 545 aaKnown RBP13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 C7orf31Q8N865 590 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 KAT2BQ92831 832 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 SCLYQ96I15 445 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 SENP7Q9BQF6 1050 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 LOXHD1Q8IVV2 1947 aa13.08□□□□□ -0.32
CYB561A3-215ENST00000540317 WDR64B1ANS9 1081 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 SLC16A3O15427 465 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 GCNT3O95395 438 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 UBA1P22314 1058 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 HNRNPH3P31942 346 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 KRT83P78385 493 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 FAM109BQ6ICB4 259 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 OTOP2Q7RTS6 562 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 TRIM59Q8IWR1 403 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 C4orf19Q8IY42 314 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 FGFBP2Q9BYJ0 223 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 WNT8AQ9H1J5 351 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 NOP56O00567 594 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 NR2F2P24468 414 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 CYLC1P35663 651 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 PSEN2P49810 448 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 PSMC5P62195 406 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 ITGB3BPQ13352 177 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 NEDD9Q14511 834 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 MFSD10Q14728 455 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 KIAA0753Q2KHM9 967 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 CYFIP1Q7L576 1253 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 SLC17A8Q8NDX2 589 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 NEK11Q8NG66 645 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 BCAS3Q9H6U6 928 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 ANKEF1Q9NU02 776 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 DNAI1Q9UI46 699 aa13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 EPN1Q9Y6I3 576 aaPredicted RBP13.07□□□□□ -0.32
CYB561A3-215ENST00000540317 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 KIF5CO60282 957 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 MYBP10242 640 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 CASQ1P31415 396 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 ICAM3P32942 547 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 CASP5P51878 434 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 BFSP2Q13515 415 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 TUBB2AQ13885 445 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 MYBPC2Q14324 1141 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 MTF1Q14872 753 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 ZNF720Q7Z2F6 126 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 FAM178BQ8IXR5 827 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 SMAP1Q8IYB5 467 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 CCDC43Q96MW1 224 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 TUBB2BQ9BVA1 445 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 LARSQ9P2J5 1176 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 NFASCO94856 1347 aa13.06□□□□□ -0.32
CYB561A3-215ENST00000540317 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 NDUFA10O95299 355 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 GNG11P61952 73 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 SP4Q02446 784 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 HS2ST1Q7LGA3 356 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 HERVK_113Q902F9 699 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 SYN2Q92777 582 aaPredicted RBP13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 DESI2Q9BSY9 194 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 MKNK1Q9BUB5 465 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 MMRN2Q9H8L6 949 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 GTF2IRD1Q9UHL9 959 aa13.05□□□□□ -0.32
CYB561A3-215ENST00000540317 PLAGL2Q9UPG8 496 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms