RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 HOXA2O43364 376 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 PRKCBP05771 671 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 KRT18P05783 430 aaKnown RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 FGFR1P11362 822 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 GATMP50440 423 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 RAB27AP51159 221 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 SMTNP53814 917 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 CACNB1Q02641 598 aaPredicted RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 RESP18Q5W5W9 173 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 MRPL10Q7Z7H8 261 aaKnown RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 CMTR2Q8IYT2 770 aaKnown RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 IQUBQ8NA54 791 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 RNF169Q8NCN4 708 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 GUCD1Q96NT3 240 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 PRDM12Q9H4Q4 367 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 FAM13BQ9NYF5 915 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 LARSQ9P2J5 1176 aaKnown RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 ARHGAP28Q9P2N2 729 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
PRPF19-204ENST00000539960 ADGRA3Q8IWK6 1321 aa14.81□□□□□ -0.04
PRPF19-204ENST00000539960 PTPRSQ13332 1948 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 SZT2Q5T011 3432 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 MYMKA6NI61 221 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 TTLL13PA6NNM8 815 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 TBKBP1A7MCY6 615 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 SLC16A4O15374 487 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 FAM13AO94988 1023 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 ATF7P17544 494 aaPredicted RBP14.8□□□□□ -0.04
PRPF19-204ENST00000539960 LIG1P18858 919 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 CMA1P23946 247 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 ZNF131P52739 623 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 PRPF4BQ13523 1007 aaKnown RBP14.8□□□□□ -0.04
PRPF19-204ENST00000539960 E2F4Q16254 413 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 SPRED2Q7Z698 418 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 MYCT1Q8N699 235 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 TMEM161BQ8NDZ6 487 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 CNNM3Q8NE01 707 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 ARNTL2Q8WYA1 636 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 DDX12PQ92771 950 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 CLP1Q92989 425 aaKnown RBP14.8□□□□□ -0.04
PRPF19-204ENST00000539960 DHX58Q96C10 678 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 PGBD4Q96DM1 585 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 CASD1Q96PB1 797 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 C17orf80Q9BSJ5 609 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 TMEM117Q9H0C3 514 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
PRPF19-204ENST00000539960 POLR2DO15514 142 aaKnown RBP14.79□□□□□ -0.04
PRPF19-204ENST00000539960 LINC00271P0C7V0 271 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 BMPR1AP36894 532 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 PAN2Q504Q3 1202 aaKnown RBP14.79□□□□□ -0.04
PRPF19-204ENST00000539960 EPC2Q52LR7 807 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 NT5DC1Q5TFE4 455 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 SLC27A1Q6PCB7 646 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 PHLPP2Q6ZVD8 1323 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 DYMQ7RTS9 669 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 CDR2LQ86X02 465 aaPredicted RBP14.79□□□□□ -0.04
PRPF19-204ENST00000539960 TMEM192Q8IY95 271 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 SMG8Q8ND04 991 aaKnown RBP14.79□□□□□ -0.04
PRPF19-204ENST00000539960 LPPQ93052 612 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 DNAJC19Q96DA6 116 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 SAMD11Q96NU1 681 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
PRPF19-204ENST00000539960 CUEDC2Q9H467 287 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 PARVGQ9HBI0 331 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 KBTBD4Q9NVX7 518 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 CNTNAP2Q9UHC6 1331 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 MTUS1Q9ULD2 1270 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 KCNH3Q9ULD8 1083 aa14.79□□□□□ -0.04
PRPF19-204ENST00000539960 EPOPA6NHQ4 379 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 MEIS3P2A8K0S8 358 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 H0YCG3 227 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 RFXAPO00287 272 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 N4BP3O15049 544 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 TBCAO75347 108 aaKnown RBP14.78□□□□□ -0.04
PRPF19-204ENST00000539960 OFD1O75665 1012 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 MAPTP10636 758 aaKnown RBP14.78□□□□□ -0.04
PRPF19-204ENST00000539960 AMPD3Q01432 767 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 TMEM132AQ24JP5 1023 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 LONRF3Q496Y0 759 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 AGMOQ6ZNB7 445 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 TAS1R3Q7RTX0 852 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 HAUS6Q7Z4H7 955 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 ABI1Q8IZP0 508 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 HELQQ8TDG4 1101 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 MYLIPQ8WY64 445 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 KCNN1Q92952 543 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 PYM1Q9BRP8 204 aaKnown RBP14.78□□□□□ -0.04
PRPF19-204ENST00000539960 LRRC27Q9C0I9 530 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 ZHX3Q9H4I2 956 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 PDZD7Q9H5P4 517 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 TYW1Q9NV66 732 aaKnown RBP14.78□□□□□ -0.04
PRPF19-204ENST00000539960 IPPQ9Y573 584 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
PRPF19-204ENST00000539960 MYH15Q9Y2K3 1946 aa14.78□□□□□ -0.04
PRPF19-204ENST00000539960 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
PRPF19-204ENST00000539960 TRAK2O60296 914 aa14.77□□□□□ -0.05
PRPF19-204ENST00000539960 EDN1P05305 212 aa14.77□□□□□ -0.05
PRPF19-204ENST00000539960 RB1P06400 928 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms