RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SMARCAD1Q9H4L7 1026 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 MAPK4P31152 587 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 VAV2P52735 878 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 KLHL30Q0D2K2 578 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 STRN3Q13033 797 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 BRDTQ58F21 947 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-204ENST00000539827 TRAPPC12Q8WVT3 735 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 MAML3Q96JK9 1138 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 SUGCTQ9HAC7 445 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 FBXL5Q9UKA1 691 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 TRPC6Q9Y210 931 aa24.43■■□□□ 1.5
HOMER3-204ENST00000539827 ZBTB42B2RXF5 422 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 CTIFO43310 598 aaKnown RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 LCA5LO95447 670 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 GH1P01241 217 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 LIG4P49917 911 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 LAMC2Q13753 1193 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 CAPSQ13938 189 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 EHBP1Q8NDI1 1231 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 NPLOC4Q8TAT6 608 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 ZNF215Q9UL58 517 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 RBM47A0AV96 593 aaKnown RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 K7ERI5 159 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 SLU7O95391 586 aaKnown RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 JAM2P57087 298 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 IRF2BP2Q7Z5L9 587 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 LRRC71Q8N4P6 559 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 PRPF31Q8WWY3 499 aaKnown RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 CCDC127Q96BQ5 260 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 IFIH1Q9BYX4 1025 aaKnown RBP24.42■■□□□ 1.5
HOMER3-204ENST00000539827 DNAJC12Q9UKB3 198 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 PPME1Q9Y570 386 aa24.42■■□□□ 1.5
HOMER3-204ENST00000539827 PNMA6AP0CW24 399 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-204ENST00000539827 GARTP22102 1010 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 ABCD1P33897 745 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 MAGEA1P43355 309 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 MKRN4PQ13434 485 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-204ENST00000539827 ZNF662Q6ZS27 426 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 GPD1LQ8N335 351 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 MYO6Q9UM54 1294 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 DUSP10Q9Y6W6 482 aa24.41■■□□□ 1.5
HOMER3-204ENST00000539827 KRT86O43790 486 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 N4BP1O75113 896 aaKnown RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 IER5Q5VY09 327 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 LMO3Q8TAP4 145 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 MANSC4A6NHS7 340 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 SLC15A5A6NIM6 579 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 LRRN2O75325 713 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 NAA30Q147X3 362 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 TAF1CQ15572 869 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 AFG1LQ8WV93 481 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 ZBTB10Q96DT7 871 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 ZBTB45Q96K62 511 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 FBXL18Q96ME1 805 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 POP1Q99575 1024 aaKnown RBP24.4■■□□□ 1.5
HOMER3-204ENST00000539827 FAM213AQ9BRX8 229 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 TMEM117Q9H0C3 514 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 MYO1AQ9UBC5 1043 aa24.4■■□□□ 1.5
HOMER3-204ENST00000539827 LRRIQ3A6PVS8 624 aaPredicted RBP24.39■■□□□ 1.49
HOMER3-204ENST00000539827 EDN1P05305 212 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 KIF5AQ12840 1032 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 RGMBQ6NW40 437 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 LRRN4CLQ8ND94 238 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 MFSD14AQ96MC6 490 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 TARS2Q9BW92 718 aaKnown RBP24.39■■□□□ 1.49
HOMER3-204ENST00000539827 RNPEPQ9H4A4 650 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 ADGRA2Q96PE1 1338 aa24.39■■□□□ 1.49
HOMER3-204ENST00000539827 ADCY3O60266 1144 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 HBP1O60381 514 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 LGALS2P05162 132 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 SLC26A2P50443 739 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 CYP24A1Q07973 514 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 EPC2Q52LR7 807 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 PARD3BQ8TEW8 1205 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 TCP11Q8WWU5 503 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 TINF2Q9BSI4 451 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 TMEM134Q9H6X4 195 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 TOPORSQ9NS56 1045 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-204ENST00000539827 APEX2Q9UBZ4 518 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 ZHX1Q9UKY1 873 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-204ENST00000539827 SIP14410 1827 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 IGKV6-21A0A0C4DH24 114 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 DCAF8L1A6NGE4 600 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 P4HA2O15460 535 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 GFPT2O94808 682 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 SRGAP2CP0DJJ0 459 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 STAT1P42224 750 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 MXI1P50539 228 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 MAP2K1Q02750 393 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-204ENST00000539827 CETN1Q12798 172 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 DRAP1Q14919 205 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-204ENST00000539827 PHLDB3Q6NSJ2 640 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 ZNF571Q7Z3V5 609 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-204ENST00000539827 SAPCD2Q86UD0 394 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 KCNN1Q92952 543 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 STK33Q9BYT3 514 aa24.38■■□□□ 1.49
HOMER3-204ENST00000539827 MACROD2A1Z1Q3 448 aa24.37■■□□□ 1.49
HOMER3-204ENST00000539827 CTAGE9A4FU28 777 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms