RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 BICD1Q96G01 975 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 POLR3FQ9H1D9 316 aaPredicted RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 PORCNQ9H237 461 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 DHX33Q9H6R0 707 aaKnown RBP11.05□□□□□ -0.64
SPARC-209ENST00000539687 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 SIX2Q9NPC8 291 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 DNAJC12Q9UKB3 198 aa11.05□□□□□ -0.64
SPARC-209ENST00000539687 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 MACROD2A1Z1Q3 448 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 ZNF263O14978 683 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 HNRNPDLO14979 420 aaKnown RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 STRNO43815 780 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 TLR2O60603 784 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 SLC34A2O95436 690 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 PAFAH1B1P43034 410 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 LIG4P49917 911 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 ERVK-9P63128 1117 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 CNTN2Q02246 1040 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 MTERF2Q49AM1 385 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 IER5Q5VY09 327 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 KRT39Q6A163 491 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 SYCE1Q8N0S2 351 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 GPD1LQ8N335 351 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 GPRC5AQ8NFJ5 357 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 POMGNT1Q8WZA1 660 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 CLMNQ96JQ2 1002 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
SPARC-209ENST00000539687 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 C2orf40Q9H1Z8 148 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 GPRC5CQ9NQ84 441 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 SNX12Q9UMY4 172 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 HYOU1Q9Y4L1 999 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 ARID2Q68CP9 1835 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 EMSYQ7Z589 1322 aa11.04□□□□□ -0.64
SPARC-209ENST00000539687 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CES2O00748 559 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 EXTL3O43909 919 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 LGR5O75473 907 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 GGPS1O95749 300 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 H2AFZP0C0S5 128 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ACTN1P12814 892 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ARL2P36404 184 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 AP3M2P53677 418 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 MFAP3P55082 362 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 SP4Q02446 784 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 PTK2Q05397 1052 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 MXD4Q14582 209 aaPredicted RBP11.03□□□□□ -0.64
SPARC-209ENST00000539687 TTLL4Q14679 1199 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 KIF22Q14807 665 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CBWD6Q4V339 395 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 EPC2Q52LR7 807 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CBWD3Q5JTY5 395 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CBWD5Q5RIA9 395 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
SPARC-209ENST00000539687 TEX35Q5T0J7 233 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 GPAT2Q6NUI2 795 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
SPARC-209ENST00000539687 H2AFVQ71UI9 128 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ANKRD23Q86SG2 305 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ZBTB8OSQ8IWT0 167 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CAGE1Q8TC20 777 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 CBWD1Q9BRT8 395 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 POLD4Q9HCU8 107 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 XPNPEP1Q9NQW7 623 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 RBPJLQ9UBG7 517 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 TRIM10Q9UDY6 481 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 ADAMTS1Q9UHI8 967 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 DDX41Q9UJV9 622 aaKnown RBP11.03□□□□□ -0.64
SPARC-209ENST00000539687 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 COQ4Q9Y3A0 265 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 STYXL1Q9Y6J8 313 aa11.03□□□□□ -0.64
SPARC-209ENST00000539687 POLR2AP24928 1970 aaKnown RBP11.03□□□□□ -0.64
SPARC-209ENST00000539687 PCNTO95613 3336 aa11.02□□□□□ -0.64
SPARC-209ENST00000539687 LCTP09848 1927 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 LRRC37A2A6NM11 1700 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 A0A087X0T9 212 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 A0A0U1RQJ8 604 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 TARSL2A2RTX5 802 aaKnown RBP11.02□□□□□ -0.65
SPARC-209ENST00000539687 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 K7ERI5 159 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 ASAP2O43150 1006 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 MAFO75444 373 aaPredicted RBP11.02□□□□□ -0.65
SPARC-209ENST00000539687 ATP1A1P05023 1023 aaKnown RBP11.02□□□□□ -0.65
SPARC-209ENST00000539687 FAM228BP0C875 321 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 TRIM49P0CI25 452 aa11.02□□□□□ -0.65
SPARC-209ENST00000539687 TRIM49CP0CI26 452 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms