RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 MYH11P35749 1972 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 LOC102724159A0A0B4J2E5 919 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 PPEF1O14829 653 aaPredicted RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 MGRN1O60291 552 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 FTLP02792 175 aaPredicted RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 GSTA1P08263 222 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 TRIM49P0CI25 452 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 TRIM49CP0CI26 452 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 BCRP11274 1271 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 KRT13P13646 458 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 RPL21P46778 160 aaKnown RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 PEX5P50542 639 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 GPC5P78333 572 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 PPP2R5CQ13362 524 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 PWP2Q15269 919 aaKnown RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 SHROOM1Q2M3G4 852 aaPredicted RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 TNFAIP8L3Q5GJ75 292 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 FAM228AQ86W67 206 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 FAM178BQ8IXR5 827 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 GPATCH11Q8N954 259 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 SLC5A5Q92911 643 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 C18orf8Q96DM3 657 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 NACC1Q96RE7 527 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 ZSWIM1Q9BR11 485 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 STRA6Q9BX79 667 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 STMN4Q9H169 189 aaPredicted RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 SEMA4AQ9H3S1 761 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 CXorf56Q9H5V9 222 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 AZI2Q9H6S1 392 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
CDH13-204ENST00000539548 TMOD4Q9NZQ9 345 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 PI4KBQ9UBF8 816 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 MCM8Q9UJA3 840 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 USP21Q9UK80 565 aa10.43□□□□□ -0.74
CDH13-204ENST00000539548 MTA2O94776 668 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 IFI35P80217 286 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 ICA1Q05084 483 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 BFSP1Q12934 665 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 NEDD9Q14511 834 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 SLMAPQ14BN4 828 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 CYP1B1Q16678 543 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 NBPF9Q3BBW0 867 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 TMEM179Q6ZVK1 233 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 KSR1Q8IVT5 923 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 ZDHHC15Q96MV8 337 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 SELENOSQ9BQE4 189 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 MRIQ9BWK5 157 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 WNT8AQ9H1J5 351 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 INTS9Q9NV88 658 aaKnown RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 CTTNBP2NLQ9P2B4 639 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 TRPC5Q9UL62 973 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 TPX2Q9ULW0 747 aaKnown RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 LOXHD1Q8IVV2 1947 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 RBBP6Q7Z6E9 1792 aaKnown RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 DDTLA6NHG4 134 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 FAM196BA6NMK8 535 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 ZBTB39O15060 712 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 P4HA2O15460 535 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 RTN2O75298 545 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 NDUFB10O96000 172 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 RARGP13631 454 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 CRKP46108 304 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 PRELPP51888 382 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 LRCH2Q5VUJ6 765 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 LRRC34Q8IZ02 419 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 ZDHHC14Q8IZN3 488 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 SLC20A1Q8WUM9 679 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 KRT35Q92764 455 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 ART4Q93070 314 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 WDR18Q9BV38 432 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 UBE2TQ9NPD8 197 aaPredicted RBP10.42□□□□□ -0.74
CDH13-204ENST00000539548 UBR3Q6ZT12 1888 aa10.42□□□□□ -0.74
CDH13-204ENST00000539548 RIPK2O43353 540 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 C21orf2O43822 256 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 EXOC3O60645 756 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 BMP3P12645 472 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 SLC8A1P32418 973 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 COILP38432 576 aaPredicted RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 ELF3P78545 371 aaPredicted RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 TRAF1Q13077 416 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 IKQ13123 557 aaPredicted RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 ODR4Q5SWX8 454 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 SEL1L2Q5TEA6 688 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 MFSD5Q6N075 450 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 CCDC137Q6PK04 289 aaKnown RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 CYFIP1Q7L576 1253 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 TMEM174Q8WUU8 243 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 CD101Q93033 1021 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 ROPN1BQ9BZX4 212 aaPredicted RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 ROPN1Q9HAT0 212 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms