RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 EBAG9O00559 213 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 SART1O43290 800 aaKnown RBP15.77■□□□□ 0.12
CDCA3-207ENST00000538862 TAL1P17542 331 aaPredicted RBP15.77■□□□□ 0.12
CDCA3-207ENST00000538862 GALCP54803 685 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 ERVK-9P63128 1117 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 GJB7Q6PEY0 223 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 NT5DC3Q86UY8 548 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 BCAS4Q8TDM0 211 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 HES6Q96HZ4 224 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 WDR11Q9BZH6 1224 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 SLITRK6Q9H5Y7 841 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 POLD4Q9HCU8 107 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 TTC7AQ9ULT0 858 aaPredicted RBP15.77■□□□□ 0.12
CDCA3-207ENST00000538862 KCNH4Q9UQ05 1017 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 DIS3Q9Y2L1 958 aaKnown RBP15.77■□□□□ 0.12
CDCA3-207ENST00000538862 FRMD4BQ9Y2L6 1034 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 TMX2Q9Y320 296 aa15.77■□□□□ 0.12
CDCA3-207ENST00000538862 NOC2LQ9Y3T9 749 aaKnown RBP15.77■□□□□ 0.12
CDCA3-207ENST00000538862 NCANO14594 1321 aa15.77■□□□□ 0.11
CDCA3-207ENST00000538862 LOXHD1Q8IVV2 1947 aa15.77■□□□□ 0.11
CDCA3-207ENST00000538862 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CAPN15O75808 1086 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CFBP00751 764 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CAP2P40123 477 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 MYBPC2Q14324 1141 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 ZC2HC1CQ53FD0 456 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 DAAM2Q86T65 1068 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 LRRC45Q96CN5 670 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 PLEKHA4Q9H4M7 779 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 GOPCQ9HD26 462 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 AMFRQ9UKV5 643 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 GAS7O60861 476 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 TMEM253P0C7T8 217 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 GUCY2CP25092 1073 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 ECHS1P30084 290 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 SETQ01105 290 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 MOGSQ13724 837 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 DRAP1Q14919 205 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 TRADDQ15628 312 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 SLC9A9Q8IVB4 645 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 FAM178BQ8IXR5 827 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 EFCAB13Q8IY85 973 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CCDC26Q8TAB7 109 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 LNX1Q8TBB1 728 aaPredicted RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 ATP6V1G3Q96LB4 118 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 CFHR5Q9BXR6 569 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 RANBP17Q9H2T7 1088 aaKnown RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 GOLPH3Q9H4A6 298 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 MRPL11Q9Y3B7 192 aaKnown RBP15.76■□□□□ 0.11
CDCA3-207ENST00000538862 AFG3L2Q9Y4W6 797 aa15.76■□□□□ 0.11
CDCA3-207ENST00000538862 KRIT1O00522 736 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 ZEB2O60315 1214 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 PLA2G6O60733 806 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 RFX1P22670 979 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 CCT5P48643 541 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 DGKZQ13574 1117 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 HLTFQ14527 1009 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDCA3-207ENST00000538862 MAATS1Q7Z4T9 603 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 OLIG1Q8TAK6 271 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 CHURC1Q8WUH1 139 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 RFFLQ8WZ73 363 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 MYH11P35749 1972 aa15.75■□□□□ 0.11
CDCA3-207ENST00000538862 CHMP2AO43633 222 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 PPP2R5EQ16537 467 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 KCTD16Q68DU8 428 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 B3GNT9Q6UX72 402 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 DNAAF5Q86Y56 855 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 PPM1EQ8WY54 764 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 SEC14L1Q92503 715 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 MCOLN1Q9GZU1 580 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 TMBIM4Q9HC24 238 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 APEX2Q9UBZ4 518 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 PLAAQ9Y263 795 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 GOLGA6L10A6NI86 522 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 SRRM3A6NNA2 597 aaPredicted RBP15.74■□□□□ 0.11
CDCA3-207ENST00000538862 ZBTB39O15060 712 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 COG2Q14746 738 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 GLYCTKQ8IVS8 523 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 SH2D3CQ8N5H7 860 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 SLC35G2Q8TBE7 412 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 NEK9Q8TD19 979 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 TMEM174Q8WUU8 243 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 CTNNBL1Q8WYA6 563 aaPredicted RBP15.74■□□□□ 0.11
CDCA3-207ENST00000538862 VTI1AQ96AJ9 217 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 ZNF577Q9BSK1 485 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 AP1M1Q9BXS5 423 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 GPR88Q9GZN0 384 aa15.74■□□□□ 0.11
CDCA3-207ENST00000538862 INTS2Q9H0H0 1204 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms