RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ACCSQ96QU6 501 aa25.82■■□□□ 1.72
TMEM260-202ENST00000538838 ANO10Q9NW15 660 aa25.82■■□□□ 1.72
TMEM260-202ENST00000538838 TRIM43BA6NCK2 446 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 TTLL13PA6NNM8 815 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 B4GALT5O43286 388 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 ABCD1P33897 745 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 LPIN1Q14693 890 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 C11orf57Q6ZUT1 292 aaPredicted RBP25.81■■□□□ 1.72
TMEM260-202ENST00000538838 FAM228AQ86W67 206 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 MLKLQ8NB16 471 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 TRIM43Q96BQ3 446 aaPredicted RBP25.81■■□□□ 1.72
TMEM260-202ENST00000538838 PRMT7Q9NVM4 692 aaPredicted RBP25.81■■□□□ 1.72
TMEM260-202ENST00000538838 PCDH10Q9P2E7 1040 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 LTBP2Q14767 1821 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 SFPQP23246 707 aaKnown RBP eCLIP25.81■■□□□ 1.72
TMEM260-202ENST00000538838 CCL23P55773 120 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 STIM1Q13586 685 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 CATSPER4Q7RTX7 472 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 C7orf61Q8IZ16 206 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 SCLYQ96I15 445 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 HTATIP2Q9BUP3 242 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 CTNND2Q9UQB3 1225 aa25.81■■□□□ 1.72
TMEM260-202ENST00000538838 KIAA0355O15063 1070 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 ERLIN2O94905 339 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 FAM187BQ17R55 369 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 BICD1Q96G01 975 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 DNAJC25Q9H1X3 360 aa25.8■■□□□ 1.72
TMEM260-202ENST00000538838 AGO3Q9H9G7 860 aaKnown RBP25.8■■□□□ 1.72
TMEM260-202ENST00000538838 CNTNAP2Q9UHC6 1331 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 TISP43B9A030 160 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 ACKR2O00590 384 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 TSPAN1O60635 241 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 RPS6KA5O75582 802 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 KIF20AO95235 890 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 PRPF4BQ13523 1007 aaKnown RBP25.79■■□□□ 1.72
TMEM260-202ENST00000538838 KNOP1Q1ED39 458 aaKnown RBP25.79■■□□□ 1.72
TMEM260-202ENST00000538838 ANO6Q4KMQ2 910 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 TSHZ1Q6ZSZ6 1077 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 SYCP3Q8IZU3 236 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 TARS2Q9BW92 718 aaKnown RBP25.79■■□□□ 1.72
TMEM260-202ENST00000538838 KCTD10Q9H3F6 313 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 TMEM206Q9H813 350 aa25.79■■□□□ 1.72
TMEM260-202ENST00000538838 PSMA7O14818 248 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 HNRNPDLO14979 420 aaKnown RBP25.78■■□□□ 1.72
TMEM260-202ENST00000538838 ITGB8P26012 769 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 CD52P31358 61 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 CPB2Q96IY4 423 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 PRIMPOLQ96LW4 560 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 MRPL4Q9BYD3 311 aaKnown RBP25.78■■□□□ 1.72
TMEM260-202ENST00000538838 EXOC7Q9UPT5 735 aa25.78■■□□□ 1.72
TMEM260-202ENST00000538838 NBNO60934 754 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PPP1R2P41236 205 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 ZNF445P59923 1031 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PAK2Q13177 524 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 GPNMBQ14956 572 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 SLC39A4Q6P5W5 647 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 LRSAM1Q6UWE0 723 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 TET1Q8NFU7 2136 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 NELFBQ8WX92 580 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 SEMA6BQ9H3T3 888 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 DACH1Q9UI36 760 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 TRIM49BA6NDI0 452 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 TGFB1I1O43294 461 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 TIMP1P01033 207 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PIGRP01833 764 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 ARF4P18085 180 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-202ENST00000538838 LIG4P49917 911 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PMS1P54277 932 aaKnown RBP25.77■■□□□ 1.72
TMEM260-202ENST00000538838 NFX1Q12986 1120 aaKnown RBP25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PAK1Q13153 545 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 TMEM132AQ24JP5 1023 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 DHTKD1Q96HY7 919 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-202ENST00000538838 GBP3Q9H0R5 595 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 ERVK-5Q9HDB9 667 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 AGPAT5Q9NUQ2 364 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 PADI3Q9ULW8 664 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 ST3GAL5Q9UNP4 418 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 SQORQ9Y6N5 450 aa25.77■■□□□ 1.72
TMEM260-202ENST00000538838 ANKRD63C9JTQ0 380 aa25.76■■□□□ 1.71
TMEM260-202ENST00000538838 RAG1P15918 1043 aa25.76■■□□□ 1.71
TMEM260-202ENST00000538838 STX17P56962 302 aa25.76■■□□□ 1.71
TMEM260-202ENST00000538838 PCBP1Q15365 356 aaKnown RBP eCLIP25.76■■□□□ 1.71
TMEM260-202ENST00000538838 CDR2LQ86X02 465 aaPredicted RBP25.76■■□□□ 1.71
TMEM260-202ENST00000538838 USP38Q8NB14 1042 aa25.76■■□□□ 1.71
TMEM260-202ENST00000538838 P2RX5Q93086 422 aa25.76■■□□□ 1.71
TMEM260-202ENST00000538838 ACO2Q99798 780 aaKnown RBP25.76■■□□□ 1.71
TMEM260-202ENST00000538838 TYW1Q9NV66 732 aaKnown RBP25.76■■□□□ 1.71
TMEM260-202ENST00000538838 PIN4Q9Y237 131 aaKnown RBP25.76■■□□□ 1.71
TMEM260-202ENST00000538838 EVI5O60447 810 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 CCNE1P24864 410 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 ZCWPW2Q504Y3 356 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 ATF7IP2Q5U623 682 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 CENPPQ6IPU0 288 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 ZPBP2Q6X784 338 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 ANKFY1Q9P2R3 1169 aa25.75■■□□□ 1.71
TMEM260-202ENST00000538838 GPR182O15218 404 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 HOXA11P31270 313 aaPredicted RBP25.74■■□□□ 1.71
TMEM260-202ENST00000538838 EEF1DP3Q658K8 133 aa25.74■■□□□ 1.71
TMEM260-202ENST00000538838 ZBTB45Q96K62 511 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms