RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TTC38Q5R3I4 469 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ANKRD20A2Q5SQ80 823 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 SH2D4BQ5SQS7 431 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ANKRD20A1Q5TYW2 823 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ANKRD20A3Q5VUR7 823 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 RNF43Q68DV7 783 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 CYB5R4Q7L1T6 521 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ASRGL1Q7L266 308 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 SPATA21Q7Z572 469 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 PNMA8AQ86V59 439 aaPredicted RBP7.26□□□□□ -1.25
USP28-207ENST00000538475 MICU3Q86XE3 530 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 CSGALNACT2Q8N6G5 542 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 PARD3BQ8TEW8 1205 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 EZH1Q92800 747 aaPredicted RBP7.26□□□□□ -1.25
USP28-207ENST00000538475 INPP5DQ92835 1189 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 P2RX5Q93086 422 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 PHKBQ93100 1093 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ZBTB10Q96DT7 871 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 TRIM11Q96F44 468 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 EPSTI1Q96J88 318 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 AK8Q96MA6 479 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 RUNDC3BQ96NL0 473 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 GORASP1Q9BQQ3 440 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 NOC4LQ9BVI4 516 aaKnown RBP7.26□□□□□ -1.25
USP28-207ENST00000538475 OSBPL1AQ9BXW6 950 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 TXLNGYQ9BZA5 131 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 RABEP2Q9H5N1 569 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 CABP5Q9NP86 173 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 DMAP1Q9NPF5 467 aaPredicted RBP7.26□□□□□ -1.25
USP28-207ENST00000538475 TXLNGQ9NUQ3 528 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 KBTBD4Q9NVX7 518 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.26□□□□□ -1.25
USP28-207ENST00000538475 AIPL1Q9NZN9 384 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 SLAIN2Q9P270 581 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ARHGAP20Q9P2F6 1191 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 WDR35Q9P2L0 1181 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 PARP2Q9UGN5 583 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 CIDEBQ9UHD4 219 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 FAM153AQ9UHL3 310 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 TMCO1Q9UM00 188 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 ARL2BPQ9Y2Y0 163 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 USP15Q9Y4E8 981 aaPredicted RBP7.26□□□□□ -1.25
USP28-207ENST00000538475 MROH7Q68CQ1 1323 aa7.26□□□□□ -1.25
USP28-207ENST00000538475 PXDNQ92626 1479 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 A0A087WZG4 1122 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 A0A0A6YYK5 440 aaPredicted RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 EME2A4GXA9 379 aaPredicted RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 KRBA1A5PL33 1030 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 F8VZ95 297 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 PGRMC1O00264 195 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 MSTNO14793 375 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 KCNQ3O43525 872 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 SNX3O60493 162 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MAP3K6O95382 1288 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 GJB6O95452 261 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 EYA4O95677 639 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 ANXA1P04083 346 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 SNRPA1P09661 255 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 UQCRFS1P1P0C7P4 283 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 CALB2P22676 271 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 ECHS1P30084 290 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 EIF4A3P38919 411 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 MSH2P43246 934 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MTIF2P46199 727 aaKnown RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 USP11P51784 963 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 HAND2P61296 217 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 NCALDP61601 193 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MXRA7P84157 204 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 LRRC63Q05C16 580 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 HLTFQ14527 1009 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP28-207ENST00000538475 WTAPQ15007 396 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 RPS6KA1Q15418 735 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 UAP1Q16222 522 aaPredicted RBP7.25□□□□□ -1.25
USP28-207ENST00000538475 GSTA3Q16772 222 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 KRT71Q3SY84 523 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 PRRT3Q5FWE3 981 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 TNFAIP8L3Q5GJ75 292 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 AKNAD1Q5T1N1 836 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 GALNT17Q6IS24 598 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MFSD5Q6N075 450 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 CNNM4Q6P4Q7 775 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 PDXDC1Q6P996 788 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 LMBR1LQ6UX01 489 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 USP49Q70CQ1 688 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 TMC3Q7Z5M5 1100 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 FAM35AQ86V20 835 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP28-207ENST00000538475 SYCE1Q8N0S2 351 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 RASGEF1CQ8N431 466 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 FANCBQ8NB91 859 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 ATL2Q8NHH9 583 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 KLHDC4Q8TBB5 520 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 NUDT8Q8WV74 236 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 TEKT4Q8WW24 435 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 MKL1Q969V6 931 aa7.25□□□□□ -1.25
USP28-207ENST00000538475 KLHL29Q96CT2 875 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms