RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PRRG1O14668 218 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 EYA4O95677 639 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 HMBSP08397 361 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 ZNF865P0CJ78 1059 aaPredicted RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 ABCB4P21439 1286 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 CCDC50Q8IVM0 306 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 URGCPQ8TCY9 931 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 MRPL4Q9BYD3 311 aaKnown RBP7.88□□□□□ -1.15
MSH6-209ENST00000538136 HCSTQ9UBK5 93 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 UBR2Q8IWV8 1755 aa7.88□□□□□ -1.15
MSH6-209ENST00000538136 GTPBP6O43824 516 aaPredicted RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 AKR1B10O60218 316 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 LY75O60449 1722 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 NEBLO76041 1014 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 ATP2A2P16615 1042 aaKnown RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 ADORA2BP29275 332 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 TNNC1P63316 161 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 MGAT5BQ3V5L5 792 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 CBWD2Q8IUF1 395 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 MAP3K14Q99558 947 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 AGXT2Q9BYV1 514 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 TRPC7Q9HCX4 862 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 ABI2Q9NYB9 513 aaPredicted RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 KIAA1468Q9P260 1216 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 NUDT5Q9UKK9 219 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 A0A087X0B3 334 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 ZNF233A6NK53 670 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 GOLGA8SH3BPF8 625 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 PURAQ00577 322 aaKnown RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 C2CD6Q53TS8 623 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 PPP2R2DQ66LE6 453 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 TTC8Q8TAM2 541 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 MSRAQ9UJ68 235 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 ANKRD31Q8N7Z5 1873 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 ASTN1O14525 1302 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 SPTLC1O15269 473 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 CALUO43852 315 aaPredicted RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 PSMD10O75832 226 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 PNMA6AP0CW24 399 aaPredicted RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 ATP1A3P13637 1013 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 CYP11B2P19099 503 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 PRCPP42785 496 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 SEMA3FQ13275 785 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 MOGSQ13724 837 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 Q7L0L9 218 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 METTL16Q86W50 562 aaKnown RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 CELF4Q9BZC1 486 aaKnown RBP7.87□□□□□ -1.15
MSH6-209ENST00000538136 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 MYO1AQ9UBC5 1043 aa7.87□□□□□ -1.15
MSH6-209ENST00000538136 NRCAMQ92823 1304 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 MEIS3P2A8K0S8 358 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 GPR182O15218 404 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 CALCAP01258 141 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 RCAN1P53805 252 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 IL17AQ16552 155 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 SKIDA1Q1XH10 827 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 FAM171A1Q5VUB5 890 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 SDHAF4Q5VUM1 108 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 MTHFD1LQ6UB35 978 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 TAB3Q8N5C8 712 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 STKLD1Q8NE28 680 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PPTC7Q8NI37 304 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 AK8Q96MA6 479 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 SNX25Q9H3E2 840 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 CHORDC1Q9UHD1 332 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 ZFHX2Q9C0A1 2572 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 SSC5DA1L4H1 1573 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 FPGSQ05932 587 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PKN2Q16513 984 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 SCYL2Q6P3W7 929 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 KIFAP3Q92845 792 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 RNF39Q9H2S5 420 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PRDM12Q9H4Q4 367 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 AGO3Q9H9G7 860 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 ROBO3Q96MS0 1386 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 FGFR1OPO95684 399 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 CYBAP13498 195 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 SMARCA1P28370 1054 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 CASP5P51878 434 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PSMC1P62191 440 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 MAP3K10Q02779 954 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 MXD4Q14582 209 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 MORN1Q5T089 497 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 ARL6IP4Q66PJ3 421 aaKnown RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 TICAM2Q86XR7 235 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
MSH6-209ENST00000538136 KCNB2Q92953 911 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 ANKRD36BP1Q96IX9 119 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 PSMB7Q99436 277 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 MIS12Q9H081 205 aa7.86□□□□□ -1.15
MSH6-209ENST00000538136 SMTNL1A8MU46 457 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 H3BQ06 376 aaPredicted RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 RECQL4O94761 1208 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 TNFSF9P41273 254 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 SPOPLQ6IQ16 392 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms