RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 FAM13CQ8NE31 585 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 DYDC1Q8WWB3 177 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 PDP2Q9P2J9 529 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 ITGA4P13612 1032 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 TCP10Q12799 353 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 NPY5RQ15761 445 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 IFIT1BQ5T764 474 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 SFMBT2Q5VUG0 894 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 RSBN1LQ6PCB5 846 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 RMDN2Q96LZ7 410 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 GBP5Q96PP8 586 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 ZDHHC18Q9NUE0 388 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 SKIP12755 728 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 RASA1P20936 1047 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 CD151P48509 253 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 CDK8P49336 464 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 ACVR2BQ13705 512 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 METTL13Q8N6R0 699 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 CELF4Q9BZC1 486 aaKnown RBP12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 IL17RBQ9NRM6 502 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 ZNRF3Q9ULT6 936 aa12.21□□□□□ -0.45
SEMA4D-221ENST00000537934 TLR2O60603 784 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 ATP6V1G1O75348 118 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 VHLP40337 213 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 PDE4DQ08499 809 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 ANKLE1Q8NAG6 615 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 INPP5DQ92835 1189 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 PRMT6Q96LA8 375 aaPredicted RBP12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 DCLRE1BQ9H816 532 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 NMRK1Q9NWW6 199 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 STOML1Q9UBI4 398 aa12.21□□□□□ -0.46
SEMA4D-221ENST00000537934 SMIM23A6NLE4 172 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 CXCL9Q07325 125 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 MGAT5Q09328 741 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 STK4Q13043 487 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 RCN2Q14257 317 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 SLC29A2Q14542 456 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 C4orf32Q8N8J7 132 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 LZICQ8WZA0 190 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 GATA6Q92908 595 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 NAP1L3Q99457 506 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 PACSIN1Q9BY11 444 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 CEP72Q9P209 647 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 TSPY3P0CV98 308 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 TSPY8P0CW00 308 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 DESP17661 470 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 SERPINB4P48594 390 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 PRELPP51888 382 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 OCRLQ01968 901 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 RNASELQ05823 741 aaKnown RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 FUT2Q10981 343 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 DUPD1Q68J44 220 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 GMLQ99445 158 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 MRIQ9BWK5 157 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 TMEM165Q9HC07 324 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
SEMA4D-221ENST00000537934 A0A087X0T9 212 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 ATP9AO75110 1047 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 TJP3O95049 919 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 FAM228BP0C875 321 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 KLRC3Q07444 240 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 MCL1Q07820 350 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 CNPY1Q3B7I2 92 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 CENPPQ6IPU0 288 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 MFSD5Q6N075 450 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 DNAJC14Q6Y2X3 702 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 CCNJLQ8IV13 435 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 CKAP2Q8WWK9 683 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 IWS1Q96ST2 819 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 TRIM31Q9BZY9 425 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 H0Y3Z8 333 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 FGFR1OPO95684 399 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 INHBCP55103 352 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 SH3BGRP55822 239 aaPredicted RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 TROAPQ12815 778 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 AUHQ13825 339 aaKnown RBP12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 LRRC14Q15048 493 aa12.19□□□□□ -0.46
SEMA4D-221ENST00000537934 C10orf76Q5T2E6 689 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms