RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MAP3K2Q9Y2U5 619 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 UTYO14607 1347 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 FAM196BA6NMK8 535 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 RNASEH1O60930 286 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PPP1R2P41236 205 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 NSUN2Q08J23 767 aaKnown RBP eCLIP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 SEPT6Q14141 434 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PUS10Q3MIT2 529 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PDXDC2PQ6P474 469 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 RFWD3Q6PCD5 774 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 RBM44Q6ZP01 1051 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TMEM87BQ96K49 555 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 NDEL1Q9GZM8 345 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ANKRD2Q9GZV1 360 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 USP29Q9HBJ7 922 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ZDHHC18Q9NUE0 388 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 ATAD3AQ9NVI7 634 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 KCNJ14Q9UNX9 436 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 DMTF1Q9Y222 760 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 PRELID1Q9Y255 219 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 TRIM17Q9Y577 477 aa9.12□□□□□ -0.95
SRGAP1-202ENST00000537556 BTNL10A8MVZ5 291 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 VILLO15195 856 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 GYG2O15488 501 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 CBX6O95503 412 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 OXSR1O95747 527 aaPredicted RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 EIF2S1P05198 315 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 IFNAR1P17181 557 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 RXRAP19793 462 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 PLTPP55058 493 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 LPIN1Q14693 890 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 DUPD1Q68J44 220 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 WDR75Q8IWA0 830 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 RASGEF1CQ8N431 466 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 CRACR2BQ8N4Y2 399 aaPredicted RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 DBNDD2Q9BQY9 259 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 CADM1Q9BY67 442 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 TPK1Q9H3S4 243 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 NDE1Q9NXR1 346 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 SSX2IPQ9Y2D8 614 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 TELO2Q9Y4R8 837 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 N6AMT1Q9Y5N5 214 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 NPHP3-ACAD11A0A0J9YXS1 232 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 F8W8V4 182 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 GSC2O15499 205 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 OR6B1O95007 311 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 GAS8O95995 478 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 FGAP02671 866 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 SERPING1P05155 500 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 CYP2C9P11712 490 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 PHBP35232 272 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 PMS1P54277 932 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 NAA20P61599 178 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 AP2B1P63010 937 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 AIMP1Q12904 312 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 NR5A1Q13285 461 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 IDI1Q13907 227 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 DIP2AQ14689 1571 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 SLC45A4Q5BKX6 768 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 MIIPQ5JXC2 388 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 C6orf163Q5TEZ5 329 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 KLHDC10Q6PID8 442 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 OTUD6AQ7L8S5 288 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 TMC4Q7Z404 712 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 COX4I2Q96KJ9 171 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 CELF4Q9BZC1 486 aaKnown RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 FHDC1Q9C0D6 1143 aaPredicted RBP9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 PLGRKTQ9HBL7 147 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 MYO5BQ9ULV0 1848 aa9.11□□□□□ -0.95
SRGAP1-202ENST00000537556 C3P01024 1663 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 SPATA31D1Q6ZQQ2 1576 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 DYTNA2CJ06 578 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 DKC1O60832 514 aaKnown RBP eCLIP9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 BRAFP15056 766 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 TAC1P20366 129 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 TUBA4AP68366 448 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 DR1Q01658 176 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 KLRC3Q07444 240 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 TFCP2Q12800 502 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 PPP2R5CQ13362 524 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 SLC18A3Q16572 532 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 ZNF423Q2M1K9 1284 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 C10orf76Q5T2E6 689 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 PDXDC1Q6P996 788 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 VSTM1Q6UX27 236 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 SYN2Q92777 582 aaPredicted RBP9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 NACC2Q96BF6 587 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 KAZALD1Q96I82 304 aa9.1□□□□□ -0.95
SRGAP1-202ENST00000537556 PRICKLE1Q96MT3 831 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms