RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IFT74Q96LB3 600 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 CYP26B1Q9NR63 512 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 PACSIN2Q9UNF0 486 aaPredicted RBP16.98■□□□□ 0.31
MKS1-204ENST00000537529 IGSF9BQ9UPX0 1349 aa16.98■□□□□ 0.31
MKS1-204ENST00000537529 LRRN2O75325 713 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 CNGA1P29973 690 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ICAM3P32942 547 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 USP37Q86T82 979 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 CBWD2Q8IUF1 395 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ARHGEF19Q8IW93 802 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ANKRD35Q8N283 1001 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 CTNNBL1Q8WYA6 563 aaPredicted RBP16.97■□□□□ 0.31
MKS1-204ENST00000537529 RFFLQ8WZ73 363 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 PDLIM7Q9NR12 457 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 CSADQ9Y600 493 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 MYH10P35580 1976 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 H3BQF6 201 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 FOXN3O00409 490 aaPredicted RBP16.97■□□□□ 0.31
MKS1-204ENST00000537529 KCNK3O14649 394 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ADSSP30520 456 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 LBX2Q6XYB7 198 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 SLFN11Q7Z7L1 901 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 TMC2Q8TDI7 906 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 SAAL1Q96ER3 474 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 AGPAT1Q99943 283 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 SELENOOQ9BVL4 669 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 STIM2Q9P246 746 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 KCNG1Q9UIX4 513 aa16.97■□□□□ 0.31
MKS1-204ENST00000537529 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 LRRIQ3A6PVS8 624 aaPredicted RBP16.96■□□□□ 0.31
MKS1-204ENST00000537529 TNFRSF8P28908 595 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 HSP90B2PQ58FF3 399 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 TREML2Q5T2D2 321 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 PEX26Q7Z412 305 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 POLR3FQ9H1D9 316 aaPredicted RBP16.96■□□□□ 0.31
MKS1-204ENST00000537529 XPNPEP1Q9NQW7 623 aa16.96■□□□□ 0.31
MKS1-204ENST00000537529 ADARB2Q9NS39 739 aaKnown RBP16.96■□□□□ 0.31
MKS1-204ENST00000537529 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
MKS1-204ENST00000537529 SUCLA2Q9P2R7 463 aaPredicted RBP16.96■□□□□ 0.31
MKS1-204ENST00000537529 GOLGB1Q14789 3259 aaKnown RBP16.96■□□□□ 0.3
MKS1-204ENST00000537529 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 SOX10P56693 466 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 TNNC1P63316 161 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 ENPEPQ07075 957 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 KRT39Q6A163 491 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 ZNF771Q7L3S4 317 aaPredicted RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 AENQ8WTP8 325 aaKnown RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 POMGNT1Q8WZA1 660 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 TMEM8AQ9HCN3 771 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 DMGDHQ9UI17 866 aaKnown RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 TELO2Q9Y4R8 837 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 TMCO5BA8MYB1 307 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 SORBS3O60504 671 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 MYBL2P10244 700 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 GARTP22102 1010 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 GTF2H1P32780 548 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 MTERF2Q49AM1 385 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 BRDTQ58F21 947 aaPredicted RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 DAAM2Q86T65 1068 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
MKS1-204ENST00000537529 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 PARD3BQ8TEW8 1205 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 HDAC7Q8WUI4 952 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 BICD1Q96G01 975 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 MFSD14AQ96MC6 490 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 MED4Q9NPJ6 270 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 ZNF302Q9NR11 478 aa16.95■□□□□ 0.3
MKS1-204ENST00000537529 A0A0G2JMZ2 1700 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 HNRNPDLO14979 420 aaKnown RBP16.94■□□□□ 0.3
MKS1-204ENST00000537529 SCP2P22307 547 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
MKS1-204ENST00000537529 MFAP3P55082 362 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 CNTN2Q02246 1040 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 EMC2Q15006 297 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 GPD1LQ8N335 351 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 CCDC127Q96BQ5 260 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 ARHGAP28Q9P2N2 729 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 HPCAL4Q9UM19 191 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 ADGRA3Q8IWK6 1321 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
MKS1-204ENST00000537529 ANKRD62A6NC57 917 aa16.93■□□□□ 0.3
MKS1-204ENST00000537529 ATG7O95352 703 aa16.93■□□□□ 0.3
MKS1-204ENST00000537529 OATP04181 439 aa16.93■□□□□ 0.3
MKS1-204ENST00000537529 SLC7A5Q01650 507 aa16.93■□□□□ 0.3
MKS1-204ENST00000537529 SP2Q02086 613 aa16.93■□□□□ 0.3
MKS1-204ENST00000537529 CYP24A1Q07973 514 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms