RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NOTUMQ6P988 496 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 MRPL10Q7Z7H8 261 aaKnown RBP14.56□□□□□ -0.08
PRKDC-206ENST00000536429 LRRC43Q8N309 656 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 P2RX5Q93086 422 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 AK8Q96MA6 479 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 FZD8Q9H461 694 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 THEGQ9P2T0 379 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 INPP5FQ9Y2H2 1132 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 IPPQ9Y573 584 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 BRWD1Q9NSI6 2320 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 FNDC1Q4ZHG4 1894 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 FGF18O76093 207 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 SKIP12755 728 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 PLCG1P19174 1290 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 AXLP30530 894 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 LONP1P36776 959 aaKnown RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 UBA7P41226 1012 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 PEX3P56589 373 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 ARSHQ5FYA8 562 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 ZBTB8OSQ8IWT0 167 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 SYT2Q8N9I0 419 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 DEPTORQ8TB45 409 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 KIFAP3Q92845 792 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 EPSTI1Q96J88 318 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 NXF3Q9H4D5 531 aaKnown RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 ZSCAN16Q9H4T2 348 aaPredicted RBP14.55□□□□□ -0.08
PRKDC-206ENST00000536429 BLOC1S4Q9NUP1 217 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 TBC1D13Q9NVG8 400 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 PCDHB12Q9Y5F1 795 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 TTC28Q96AY4 2481 aa14.55□□□□□ -0.08
PRKDC-206ENST00000536429 A0A1B0GUA9 196 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NT5C1B-RDH14C9J2C7 533 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NPTXRO95502 500 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 PRKCBP05771 671 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 HSP90AA1P07900 732 aaKnown RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 LAG3P18627 525 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NCLP19338 710 aaKnown RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 GUCY2CP25092 1073 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 GTF2F1P35269 517 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NPTX2P47972 431 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 FAM187BQ17R55 369 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 FOXD4L6Q3SYB3 417 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 TIGD5Q53EQ6 642 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NAALADL2Q58DX5 795 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 EEF1DP3Q658K8 133 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 KCNT2Q6UVM3 1135 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 GLB1LQ6UWU2 654 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 FOXD4L3Q6VB84 417 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 ADGRD2Q7Z7M1 963 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 TMEM173Q86WV6 379 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 ZNF280BQ86YH2 543 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 THNSL1Q8IYQ7 743 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 CCDC51Q96ER9 411 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 IFT74Q96LB3 600 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 APOL6Q9BWW8 343 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 LMAN2LQ9H0V9 348 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 C2orf40Q9H1Z8 148 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 PDZD7Q9H5P4 517 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 PRMT7Q9NVM4 692 aaPredicted RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
PRKDC-206ENST00000536429 NLRC5Q86WI3 1866 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 CUL9Q8IWT3 2517 aa14.54□□□□□ -0.08
PRKDC-206ENST00000536429 RALGAPA2Q2PPJ7 1873 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 KIAA1671Q9BY89 1806 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 ACKR2O00590 384 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 AKAP5P24588 427 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 BCAR1P56945 870 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 ERVFC1P60507 584 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 DHX8Q14562 1220 aaKnown RBP14.53□□□□□ -0.08
PRKDC-206ENST00000536429 MCM6Q14566 821 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 SLC39A14Q15043 492 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 PPP2R5AQ15172 486 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 MAPK6Q16659 721 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 NT5DC1Q5TFE4 455 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 TAS1R3Q7RTX0 852 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 BCL7CQ8WUZ0 217 aaPredicted RBP14.53□□□□□ -0.08
PRKDC-206ENST00000536429 SYMPKQ92797 1274 aaKnown RBP14.53□□□□□ -0.08
PRKDC-206ENST00000536429 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 ZFP42Q96MM3 310 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 ZNF558Q96NG5 402 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 NSUN3Q9H649 340 aaKnown RBP14.53□□□□□ -0.08
PRKDC-206ENST00000536429 NRDE2Q9H7Z3 1164 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 RSAD1Q9HA92 442 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 AAASQ9NRG9 546 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 MIOSQ9NXC5 875 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
PRKDC-206ENST00000536429 DNAJB4Q9UDY4 337 aa14.53□□□□□ -0.08
PRKDC-206ENST00000536429 CCDC169A6NNP5 214 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms