RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 BCAR1P56945 870 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 PTGDRQ13258 359 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 KRT79Q5XKE5 535 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 DTHD1Q6ZMT9 781 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 CSRNP2Q9H175 543 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 POLR3FQ9H1D9 316 aaPredicted RBP13.17□□□□□ -0.3
KNTC1-208ENST00000535410 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 XPNPEP1Q9NQW7 623 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
KNTC1-208ENST00000535410 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 WNT7AO00755 349 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 FSCN2O14926 492 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
KNTC1-208ENST00000535410 MED24O75448 989 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 ALADP13716 330 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 GLRA2P23416 452 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 IRS1P35568 1242 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 LTBRP36941 435 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 ERVFC1P60507 584 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 COASYQ13057 564 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
KNTC1-208ENST00000535410 DUSP6Q16828 381 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
KNTC1-208ENST00000535410 ADHFE1Q8IWW8 467 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 KIFAP3Q92845 792 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 TMEM175Q9BSA9 504 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 MINDY3Q9H8M7 445 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
KNTC1-208ENST00000535410 DNM3Q9UQ16 869 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 VCANP13611 3396 aa13.16□□□□□ -0.3
KNTC1-208ENST00000535410 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 TSPAN1O60635 241 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 ABCB7O75027 752 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 EYA4O95677 639 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 IL9P15248 144 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
KNTC1-208ENST00000535410 GJB2P29033 226 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 EFNA5P52803 228 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 CAPSQ13938 189 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 MAPK6Q16659 721 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 TMEM132AQ24JP5 1023 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 SLC27A1Q6PCB7 646 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
KNTC1-208ENST00000535410 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
KNTC1-208ENST00000535410 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 LPPQ93052 612 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
KNTC1-208ENST00000535410 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 PER2O15055 1255 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 MBTPS2O43462 519 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 CXCL14O95715 111 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 BMP15O95972 392 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 GALTP07902 379 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 PDCP20941 246 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 GTF2F1P35269 517 aaKnown RBP eCLIP13.14□□□□□ -0.31
KNTC1-208ENST00000535410 NAMPTP43490 491 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 UBXN11Q5T124 520 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
KNTC1-208ENST00000535410 POTEGQ6S5H5 508 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 AGMOQ6ZNB7 445 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 MAEAQ7L5Y9 396 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 IGSF22Q8N9C0 903 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 NRDE2Q9H7Z3 1164 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
KNTC1-208ENST00000535410 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 IPPQ9Y573 584 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
KNTC1-208ENST00000535410 FNDC1Q4ZHG4 1894 aaPredicted RBP13.13□□□□□ -0.31
KNTC1-208ENST00000535410 ZMYM2Q9UBW7 1377 aa13.13□□□□□ -0.31
KNTC1-208ENST00000535410 A0A087WWV3 80 aa13.13□□□□□ -0.31
KNTC1-208ENST00000535410 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
KNTC1-208ENST00000535410 N4BP3O15049 544 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms