RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TMEM60Q9H2L4 133 aa18.01■□□□□ 0.47
CLSTN3-204ENST00000535313 NRDE2Q9H7Z3 1164 aa18.01■□□□□ 0.47
CLSTN3-204ENST00000535313 RSAD1Q9HA92 442 aa18.01■□□□□ 0.47
CLSTN3-204ENST00000535313 KANSL3Q9P2N6 904 aa18.01■□□□□ 0.47
CLSTN3-204ENST00000535313 POTEMA6NI47 508 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 INO80B-WBP1J3KQ70 363 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 CXCL14O95715 111 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 GALTP07902 379 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
CLSTN3-204ENST00000535313 HOXB8P17481 243 aaPredicted RBP18■□□□□ 0.47
CLSTN3-204ENST00000535313 AXLP30530 894 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 RARRES1P49788 294 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 POU5F1BQ06416 359 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 GNL2Q13823 731 aaKnown RBP18■□□□□ 0.47
CLSTN3-204ENST00000535313 KCNC3Q14003 757 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 UBXN11Q5T124 520 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 NOTUMQ6P988 496 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 AGMOQ6ZNB7 445 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 CASP10Q92851 521 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 CCDC51Q96ER9 411 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 IGSF21Q96ID5 467 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 FAM193BQ96PV7 902 aaPredicted RBP18■□□□□ 0.47
CLSTN3-204ENST00000535313 FOXP1Q9H334 677 aaPredicted RBP18■□□□□ 0.47
CLSTN3-204ENST00000535313 UBN1Q9NPG3 1134 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
CLSTN3-204ENST00000535313 MUTYHQ9UIF7 546 aa18■□□□□ 0.47
CLSTN3-204ENST00000535313 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ARL2P36404 184 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ORC2Q13416 577 aaPredicted RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 GIT2Q14161 759 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 HERC4Q5GLZ8 1057 aaPredicted RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 TMEM173Q86WV6 379 aaPredicted RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 IFNLR1Q8IU57 520 aaPredicted RBP17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ERMNQ8TAM6 284 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ASAP3Q8TDY4 903 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 SUSD6Q92537 303 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 FAM122AQ96E09 287 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 TUFT1Q9NNX1 390 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ARID2Q68CP9 1835 aa17.99■□□□□ 0.47
CLSTN3-204ENST00000535313 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 TSPAN1O60635 241 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 CLASP2O75122 1294 aaKnown RBP17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 OR52Z1P0C646 297 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 ITGA4P13612 1032 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 SLC11A1P49279 550 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 CAPSQ13938 189 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 ZNF174Q15697 407 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 SYCE2Q6PIF2 218 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 ZNF280BQ86YH2 543 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 FBXO18Q8NFZ0 1043 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 RPGRIP1Q96KN7 1286 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 APOL5Q9BWW9 433 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 ZBP1Q9H171 429 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 POLR3FQ9H1D9 316 aaPredicted RBP17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 S1PR5Q9H228 398 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 DNAJB4Q9UDY4 337 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 STK39Q9UEW8 545 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 ARIH1Q9Y4X5 557 aaPredicted RBP17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 HCFC2Q9Y5Z7 792 aa17.98■□□□□ 0.47
CLSTN3-204ENST00000535313 A0A087WWV3 80 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 ALDH2P05091 517 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 SPATA31C1P0DKV0 1188 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CTSAP10619 480 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 GLRA2P23416 452 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 PLA2G5P39877 138 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 MBTD1Q05BQ5 628 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CBX2Q14781 532 aaPredicted RBP17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CES5AQ6NT32 575 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CATSPER3Q86XQ3 398 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 HACE1Q8IYU2 909 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CPB2Q96IY4 423 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 NACC1Q96RE7 527 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 TMEM175Q9BSA9 504 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 POLR3CQ9BUI4 534 aaPredicted RBP17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 NFKBIZQ9BYH8 718 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 TRIM6Q9C030 488 aaPredicted RBP17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 NOL7Q9UMY1 257 aaKnown RBP17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 IPPQ9Y573 584 aa17.97■□□□□ 0.47
CLSTN3-204ENST00000535313 MED24O75448 989 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 DDHD2O94830 711 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 POMCP01189 267 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 TRAPPC10P48553 1259 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 AFF1P51825 1210 aaKnown RBP17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 TTC38Q5R3I4 469 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 SMG8Q8ND04 991 aaKnown RBP17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 BCL7CQ8WUZ0 217 aaPredicted RBP17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 AUTS2Q8WXX7 1259 aa17.96■□□□□ 0.47
CLSTN3-204ENST00000535313 EIF2AQ9BY44 585 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms