RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 SAAL1Q96ER3 474 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 PCMTD1Q96MG8 357 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 TMEM134Q9H6X4 195 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 MFAP3LO75121 409 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 PGK1P00558 417 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 SKILP12757 684 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 SCP2P22307 547 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 LIG4P49917 911 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 KCNMA1Q12791 1236 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 ZNF296Q8WUU4 475 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 POMGNT1Q8WZA1 660 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 CCDC113Q9H0I3 377 aa22.21■■□□□ 1.15
TNFRSF1A-205ENST00000534885 TTC26A0AVF1 554 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TTLL13PA6NNM8 815 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 HAS3O00219 553 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 AFPP02771 609 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PSEN2P49810 448 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 GJA9P57773 515 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PURAQ00577 322 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TRIM14Q14142 442 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PPP1R16BQ96T49 567 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TARS2Q9BW92 718 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TTYH3Q9C0H2 523 aa22.2■■□□□ 1.14
TNFRSF1A-205ENST00000534885 VTNP04004 478 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TRIM21P19474 475 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 EFNA5P52803 228 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PPP2R3AQ06190 1150 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CRACR2AQ9BSW2 395 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FAM207AQ9NSI2 230 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 AKT3Q9Y243 479 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TRIP12Q14669 1992 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 EPHB6O15197 1021 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MSCO60682 206 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FKTNO75072 461 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PIGRP01833 764 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ADRB2P07550 413 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 RARBP10826 455 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 BFSP1Q12934 665 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TFDP1Q14186 410 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 HIC1Q14526 733 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 GNASQ5JWF2 1037 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CBWD2Q8IUF1 395 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ZBTB8OSQ8IWT0 167 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 C17orf53Q8N3J3 647 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 RAET1EQ8TD07 263 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TMX1Q9H3N1 280 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MMRN2Q9H8L6 949 aa22.19■■□□□ 1.14
TNFRSF1A-205ENST00000534885 NRCAMQ92823 1304 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 RRN3P2A6NIE6 340 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TRIM49P0CI25 452 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TRIM49CP0CI26 452 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TMOD1P28289 359 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TMEM139Q8IV31 216 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ERO1AQ96HE7 468 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ZBTB45Q96K62 511 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 HAPLN2Q9GZV7 340 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TSKSQ9UJT2 592 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ASAP2O43150 1006 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 HMGCRP04035 888 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 TPM1P09493 284 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 GARTP22102 1010 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 DLG4P78352 724 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 SNRNP35Q16560 246 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 NFRKBQ6P4R8 1299 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CNGA4Q8IV77 575 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 UPF3AQ9H1J1 476 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 C2orf40Q9H1Z8 148 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MINDY3Q9H8M7 445 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 IFT122Q9HBG6 1241 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 AGPAT5Q9NUQ2 364 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 SAGE1Q9NXZ1 904 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 STYXL1Q9Y6J8 313 aa22.18■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PRKCBP05771 671 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CLCN1P35523 988 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 KRT9P35527 623 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PTENP60484 403 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MAPK6Q16659 721 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 INTS8Q75QN2 995 aaKnown RBP22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 KIAA0319LQ8IZA0 1049 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 KIAA1524Q8TCG1 905 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PLEKHO2Q8TD55 490 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ANKFY1Q9P2R3 1169 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CAPN11Q9UMQ6 739 aa22.17■■□□□ 1.14
TNFRSF1A-205ENST00000534885 A0A087WZ62 844 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 INO80B-WBP1J3KQ70 363 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 GNRH1P01148 92 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MAP3K21Q5TCX8 1036 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FBXL18Q96ME1 805 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 PANX2Q96RD6 677 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 FDXACB1Q9BRP7 624 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 NUP58Q9BVL2 599 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 INO80BQ9C086 356 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 XPNPEP3Q9NQH7 507 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ABHD10Q9NUJ1 306 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 MAPK13O15264 365 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 ADAMTS4O75173 837 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 CSDE1O75534 798 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 IQCF3P0C7M6 154 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 KRT13P13646 458 aa22.16■■□□□ 1.14
TNFRSF1A-205ENST00000534885 APBA1Q02410 837 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms