RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 TCF25Q9BQ70 676 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 NCDNQ9UBB6 729 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 MCM8Q9UJA3 840 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 RCAN3Q9UKA8 241 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 SH3BP1Q9Y3L3 701 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 PHLDB1Q86UU1 1377 aa5.5□□□□□ -1.53
ATPAF1-211ENST00000534216 PRKD3O94806 890 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 SCAND1P57086 179 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 SPIDRQ14159 915 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 SPDYAQ5MJ70 313 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 TGFBRAP1Q8WUH2 860 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 AHCYL2Q96HN2 611 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 RAX2Q96IS3 184 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 ORAI2Q96SN7 254 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 TLR9Q9NR96 1032 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 C14orf119Q9NWQ9 140 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 DPP7Q9UHL4 492 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 EDARQ9UNE0 448 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
ATPAF1-211ENST00000534216 NRP1O14786 923 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 TMEM127O75204 238 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 NPEPPSP55786 919 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 HHEXQ03014 270 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 SPRED1Q7Z699 444 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 SGMS1Q86VZ5 419 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 MSL3Q8N5Y2 521 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 ENKD1Q9H0I2 346 aa5.48□□□□□ -1.53
ATPAF1-211ENST00000534216 CAPN14A8MX76 684 aa5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 K7ESF4 209 aa5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 LTA4HP09960 611 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 HIBADHP31937 336 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 WNT3AP56704 352 aa5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 ERVK-21P61565 698 aa5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 MRPS9P82933 396 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 MEF2AQ02078 507 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 FKBP15Q5T1M5 1219 aa5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 QRSL1Q9H0R6 528 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 HECAQ9UBI9 543 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-211ENST00000534216 MATN3O15232 486 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 STC2O76061 302 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 GPR3P46089 330 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 ELAVL1Q15717 326 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 MFSD5Q6N075 450 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 ABHD15Q6UXT9 468 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 KCNK18Q7Z418 384 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 NECAB2Q7Z6G3 386 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 ANKRD35Q8N283 1001 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 TSPEARQ8WU66 669 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 AUTS2Q8WXX7 1259 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 ARL8AQ96BM9 186 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 ZNF512Q96ME7 567 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 SLC5A4Q9NY91 659 aa5.46□□□□□ -1.54
ATPAF1-211ENST00000534216 PLSCR1O15162 318 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CYP27B1O15528 508 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 PRAMEF4O60810 478 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CFBP00751 764 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 MTHFD2P13995 350 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 TNFRSF1AP19438 455 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CTSSP25774 331 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 ACRV1P26436 265 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CASRP41180 1078 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CDK17Q00537 523 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 AMPD3Q01432 767 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 DUSP2Q05923 314 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 MUM1Q2TAK8 710 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 C19orf54Q5BKX5 351 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 TOR2AQ5JU69 321 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 THEMISQ8N1K5 641 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 OR5M3Q8NGP4 307 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 SNX33Q8WV41 574 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 EXTL1Q92935 676 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 MIEF2Q96C03 454 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 PAWRQ96IZ0 340 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 PUS7LQ9H0K6 701 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 CCM2LQ9NUG4 571 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 GIT1Q9Y2X7 761 aa5.45□□□□□ -1.54
ATPAF1-211ENST00000534216 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 HOXA3O43365 443 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 CDK11BP21127 795 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 CCT2P78371 535 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 SRSF2Q01130 221 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 KLF1Q13351 362 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 FAM214AQ32MH5 1076 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 NRN1LQ496H8 165 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 USP39Q53GS9 565 aaKnown RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 BTNL9Q6UXG8 535 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 RNF207Q6ZRF8 634 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 ELOA2Q8IYF1 753 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 CNTD1Q8N815 330 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 MENTQ9BUN1 341 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 TRIM8Q9BZR9 551 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 IFT122Q9HBG6 1241 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 DNAJC28Q9NX36 388 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 WASHC2AQ641Q2 1341 aa5.44□□□□□ -1.54
ATPAF1-211ENST00000534216 RPTORQ8N122 1335 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms