RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SPECC1Q5M775 1068 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 GPBP1Q86WP2 473 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 SYT2Q8N9I0 419 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 SLC17A8Q8NDX2 589 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 BSNDQ8WZ55 320 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 SYMPKQ92797 1274 aaKnown RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 LPPQ93052 612 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 KMT5AQ9NQR1 393 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 TYW1Q9NV66 732 aaKnown RBP14.77□□□□□ -0.05
CAPN1-227ENST00000533909 CFAP45Q9UL16 551 aa14.77□□□□□ -0.05
CAPN1-227ENST00000533909 CNTNAP2Q9UHC6 1331 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 K7ERI5 159 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 B4GALT5O43286 388 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 LPXNO60711 386 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 ZNF623O75123 536 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 CSPG5O95196 566 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 ARF4P18085 180 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-227ENST00000533909 POU3F3P20264 500 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-227ENST00000533909 GUCY2CP25092 1073 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 RRAGBQ5VZM2 374 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 SLC27A1Q6PCB7 646 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 C1orf186Q6ZWK4 172 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 ZNF598Q86UK7 904 aaKnown RBP14.76□□□□□ -0.05
CAPN1-227ENST00000533909 MRPL38Q96DV4 380 aaKnown RBP14.76□□□□□ -0.05
CAPN1-227ENST00000533909 EPSTI1Q96J88 318 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 CASD1Q96PB1 797 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 KIFC3Q9BVG8 833 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 CCSER1Q9C0I3 900 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
CAPN1-227ENST00000533909 RBM19Q9Y4C8 960 aaKnown RBP14.76□□□□□ -0.05
CAPN1-227ENST00000533909 COL4A4P53420 1690 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 C5orf67F2Z3F1 127 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ACKR2O00590 384 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 N4BP3O15049 544 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 FAM13AO94988 1023 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 NPTXRO95502 500 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 YEATS4O95619 227 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ATF7P17544 494 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 NPTX2P47972 431 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 AMHR2Q16671 573 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 FAM187BQ17R55 369 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 NOMO2Q5JPE7 1267 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 CLLU1OSQ5K130 101 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ATL3Q6DD88 541 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 CCDC73Q6ZRK6 1079 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 LINC00301Q8NCQ3 95 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 KCNG4Q8TDN1 519 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 RAD54LQ92698 747 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 P2RX5Q93086 422 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ZNF558Q96NG5 402 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 APOL6Q9BWW8 343 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 LMAN2LQ9H0V9 348 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 FZD8Q9H461 694 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ZHX3Q9H4I2 956 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 RSAD1Q9HA92 442 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 ALG13Q9NP73 1137 aaKnown RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 IPPQ9Y573 584 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 MORC2Q9Y6X9 1032 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-227ENST00000533909 RALGAPA2Q2PPJ7 1873 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 NLRC5Q86WI3 1866 aa14.75□□□□□ -0.05
CAPN1-227ENST00000533909 CARNS1A5YM72 827 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 SFI1A8K8P3 1242 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 H0YCG3 227 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 PLS3P13797 630 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 PPM1AP35813 382 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 STAT6P42226 847 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 ME1P48163 572 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 ALDH7A1P49419 539 aaKnown RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 STRN3Q13033 797 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 PKP1Q13835 747 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 MCM6Q14566 821 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 UBXN11Q5T124 520 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 MRPL10Q7Z7H8 261 aaKnown RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 CDR2LQ86X02 465 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 PPP2R3CQ969Q6 453 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 FAM193BQ96PV7 902 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 GBP3Q9H0R5 595 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 LARSQ9P2J5 1176 aaKnown RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 KANSL3Q9P2N6 904 aa14.74□□□□□ -0.05
CAPN1-227ENST00000533909 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
CAPN1-227ENST00000533909 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms