RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 CATSPER3Q86XQ3 398 aa16.36■□□□□ 0.21
RRP8-204ENST00000533907 SPDL1Q96EA4 605 aa16.36■□□□□ 0.21
RRP8-204ENST00000533907 SERPINB12Q96P63 405 aa16.36■□□□□ 0.21
RRP8-204ENST00000533907 COG5Q9UP83 839 aa16.36■□□□□ 0.21
RRP8-204ENST00000533907 PCDHB13Q9Y5F0 798 aa16.36■□□□□ 0.21
RRP8-204ENST00000533907 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
RRP8-204ENST00000533907 GCNT3O95395 438 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 KRT16P08779 473 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 ATP2A2P16615 1042 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 RFX1P22670 979 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 RPA1P27694 616 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 GCKP35557 465 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 FMO5P49326 533 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.215e-6■□□□□ 10.8
RRP8-204ENST00000533907 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 KIF22Q14807 665 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 TTC27Q6P3X3 843 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 UHMK1Q8TAS1 419 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 MKNK1Q9BUB5 465 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 GPR88Q9GZN0 384 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 DBR1Q9UK59 544 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 ALG6Q9Y672 507 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 TMEM120BA0PK00 339 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 CLIC2O15247 247 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 BBOX1O75936 387 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 TTLL1O95922 423 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 GAP43P17677 238 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 SPIRE1Q08AE8 756 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 CCDC38Q502W7 563 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 GPATCH4Q5T3I0 446 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 PRCCQ92733 491 aaPredicted RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 RPS6KC1Q96S38 1066 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 SEPT11Q9NVA2 429 aaKnown RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
RRP8-204ENST00000533907 CORO1CQ9ULV4 474 aaPredicted RBP16.35■□□□□ 0.21
RRP8-204ENST00000533907 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 TBX3O15119 743 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 CCNB1P14635 433 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 CCNHP51946 323 aaPredicted RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 CCDC15Q0P6D6 951 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 C11orf91Q3C1V1 193 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 ZNF568Q3ZCX4 644 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 NUGGCQ68CJ6 796 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 VSTM1Q6UX27 236 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 ERICH1Q86X53 443 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 CEP120Q8N960 986 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 CKAP2Q8WWK9 683 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 ARHGEF2Q92974 986 aaKnown RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 RAB3IPQ96QF0 476 aaPredicted RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 APEX2Q9UBZ4 518 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 PRKAG3Q9UGI9 489 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 GREB1LQ9C091 1923 aaPredicted RBP16.34■□□□□ 0.21
RRP8-204ENST00000533907 ZMYM2Q9UBW7 1377 aa16.34■□□□□ 0.21
RRP8-204ENST00000533907 SKAP2O75563 359 aaPredicted RBP16.33■□□□□ 0.21
RRP8-204ENST00000533907 PDE6BP35913 854 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 COILP38432 576 aaPredicted RBP16.33■□□□□ 0.21
RRP8-204ENST00000533907 RHBDL3P58872 404 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 PSMC6P62333 389 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 LMNB2Q03252 620 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 CALCOCO2Q13137 446 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 RNF43Q68DV7 783 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 AADACL2Q6P093 401 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.21
RRP8-204ENST00000533907 ETNPPLQ8TBG4 499 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 MGARPQ8TDB4 240 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 KRT35Q92764 455 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 USP40Q9NVE5 1235 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 TAS2R14Q9NYV8 317 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 CTTNBP2NLQ9P2B4 639 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 GGT7Q9UJ14 662 aa16.33■□□□□ 0.21
RRP8-204ENST00000533907 A8MUI8 341 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 TGFB1I1O43294 461 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 SPATA31C1P0DKV0 1188 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 ACVR2BQ13705 512 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 BLMHQ13867 455 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 CTTNQ14247 550 aaKnown RBP16.33■□□□□ 0.2
RRP8-204ENST00000533907 LRRC14Q15048 493 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 ANKRD20A2Q5SQ80 823 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 ANKRD20A1Q5TYW2 823 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 ANKRD20A3Q5VUR7 823 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 MIS18BP1Q6P0N0 1132 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 SLF2Q8IX21 1173 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 CCDC105Q8IYK2 499 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 KIF2BQ8N4N8 673 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 UIMC1Q96RL1 719 aa16.33■□□□□ 0.2
RRP8-204ENST00000533907 AGPAT1Q99943 283 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms