RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PLS3P13797 630 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 CA4P22748 312 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 MESDQ14696 234 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 CLEC10AQ8IUN9 316 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 KLHL7Q8IXQ5 586 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 KRT12Q99456 494 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 COLEC11Q9BWP8 271 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 HPCAL4Q9UM19 191 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 STK38LQ9Y2H1 464 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 TXNDC9O14530 226 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 SLC16A3O15427 465 aaKnown RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 GFPT2O94808 682 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 TXNRD3Q86VQ6 643 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 CD302Q8IX05 232 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 LSM7Q9UK45 103 aaKnown RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 CSPG5O95196 566 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 ADCY8P40145 1251 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 PNPLA4P41247 253 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 TRIM68Q6AZZ1 485 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 SDCCAG8Q86SQ7 713 aaPredicted RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 GANCQ8TET4 914 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 A8MXQ7 604 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 PCSK1P29120 753 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 EPHB1P54762 984 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 RAD51Q06609 339 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 TRIM31Q9BZY9 425 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
AMBRA1-211ENST00000533727 IGSF9BQ9UPX0 1349 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 MOCS3O95396 460 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 KRT1P04264 644 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 CRY2Q49AN0 593 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 RNF14Q9UBS8 474 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 CYBBP04839 570 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 ATF2P15336 505 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TFDP2Q14188 446 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 SV2CQ496J9 727 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 SPATA2LQ8IUW3 424 aaPredicted RBP12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 APPL2Q8NEU8 664 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 GPT2Q8TD30 523 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TRIM4Q9C037 500 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 VPS37BQ9H9H4 285 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TRIM17Q9Y577 477 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 GAKO14976 1311 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TBC1D12O60347 775 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 FKTNO75072 461 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 RPA1P27694 616 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TCP11X2Q5H9J9 407 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 EFCAB12Q6NXP0 572 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 CEP72Q9P209 647 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 PPP2R2CQ9Y2T4 447 aa12.05□□□□□ -0.48
AMBRA1-211ENST00000533727 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 CLTAP09496 248 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TCF7P36402 384 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 PPARDQ03181 441 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 PDE1CQ14123 709 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TMEM132DQ14C87 1099 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 E2F5Q15329 346 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 E2F4Q16254 413 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 DPCR1Q3MIW9 517 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 RASIP1Q5U651 963 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 HHATQ5VTY9 493 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 ANKRD20A3Q5VUR7 823 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 SMYD4Q8IYR2 804 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 CCNYQ8ND76 341 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 DPF3Q92784 378 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 PSMB7Q99436 277 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 DNAJC12Q9UKB3 198 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 AFG3L2Q9Y4W6 797 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 S100BP04271 92 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.482e-9■■■■■ 37.9
AMBRA1-211ENST00000533727 FRMD5Q7Z6J6 570 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 KCTD6Q8NC69 237 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 FBXL13Q8NEE6 735 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 CASP14P31944 242 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TAP1Q03518 808 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 SF3A3Q12874 501 aaKnown RBP eCLIP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 PCNX4Q63HM2 1172 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 ICE2Q659A1 982 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms