RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 MAPK8IP1Q9UQF2 711 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 USP20Q9Y2K6 914 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 SQORQ9Y6N5 450 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 PHLPP2Q6ZVD8 1323 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 SYCE3A1L190 88 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 EVI5O60447 810 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 TSPAN1O60635 241 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 NBNO60934 754 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 RAG1P15918 1043 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 SFPQP23246 707 aaKnown RBP eCLIP13.09□□□□□ -0.31
COMMD9-208ENST00000533643 CD52P31358 61 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 STRN3Q13033 797 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 SASS6Q6UVJ0 657 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 TSHZ1Q6ZSZ6 1077 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 GUF1Q8N442 669 aaKnown RBP13.09□□□□□ -0.31
COMMD9-208ENST00000533643 USP38Q8NB14 1042 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 PRMT7Q9NVM4 692 aaPredicted RBP13.09□□□□□ -0.31
COMMD9-208ENST00000533643 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 PADI3Q9ULW8 664 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 ST3GAL5Q9UNP4 418 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 ALPK3Q96L96 1907 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 UBE4BO95155 1302 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 MYH11P35749 1972 aa13.09□□□□□ -0.31
COMMD9-208ENST00000533643 ANKRD63C9JTQ0 380 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 B4GALT5O43286 388 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 CXCL10P02778 98 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 TYRO3Q06418 890 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 MFSD5Q6N075 450 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 SLC39A4Q6P5W5 647 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 MLKLQ8NB16 471 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 DPF3Q92784 378 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 VWCEQ96DN2 955 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 PRIMPOLQ96LW4 560 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 ACO2Q99798 780 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 FUCA2Q9BTY2 467 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
COMMD9-208ENST00000533643 KCTD10Q9H3F6 313 aa13.08□□□□□ -0.32
COMMD9-208ENST00000533643 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 TISP43B9A030 160 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 GPR182O15218 404 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 TGFB1I1O43294 461 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 ERLIN2O94905 339 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 KIF20AO95235 890 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 PIGRP01833 764 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
COMMD9-208ENST00000533643 RFC2P35250 354 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 PAK2Q13177 524 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 STIM1Q13586 685 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 STX1AQ16623 288 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 SYCP3Q8IZU3 236 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 BICD1Q96G01 975 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
COMMD9-208ENST00000533643 CPB2Q96IY4 423 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 TMEM206Q9H813 350 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 EXOC7Q9UPT5 735 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 CNTNAP2Q9UHC6 1331 aa13.07□□□□□ -0.32
COMMD9-208ENST00000533643 SIP14410 1827 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 A0A1B0GUA9 196 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 HNRNPDLO14979 420 aaKnown RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 CCDC192P0DO97 292 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 CSF2RAP15509 400 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 SYN1P17600 705 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 AXLP30530 894 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 PPP1R2P41236 205 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 NFX1Q12986 1120 aaKnown RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 DSC3Q14574 896 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 TCTN1Q2MV58 587 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 EEF1DP3Q658K8 133 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 CENPPQ6IPU0 288 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 ZPBP2Q6X784 338 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 TMEM199Q8N511 208 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 BADQ92934 168 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 ZBTB45Q96K62 511 aaPredicted RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 IFIH1Q9BYX4 1025 aaKnown RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 GBP3Q9H0R5 595 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 PDZD7Q9H5P4 517 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
COMMD9-208ENST00000533643 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
COMMD9-208ENST00000533643 PDXKO00764 312 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms