RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 FAM187BQ17R55 369 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 ARL6IP4Q66PJ3 421 aaKnown RBP24.7■■□□□ 1.54
BEST1-207ENST00000533521 CDCA2Q69YH5 1023 aaPredicted RBP24.7■■□□□ 1.54
BEST1-207ENST00000533521 PADI6Q6TGC4 694 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 DTHD1Q6ZMT9 781 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 PPP4R3CPQ6ZMV5 832 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 CSRNP2Q9H175 543 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 STK39Q9UEW8 545 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 ZMYM2Q9UBW7 1377 aa24.69■■□□□ 1.54
BEST1-207ENST00000533521 MUC3AQ02505 3323 aa24.69■■□□□ 1.54
BEST1-207ENST00000533521 PTCRAQ6ISU1 281 aaPredicted RBP24.69■■□□□ 1.54
BEST1-207ENST00000533521 AGMOQ6ZNB7 445 aa24.69■■□□□ 1.54
BEST1-207ENST00000533521 C2orf40Q9H1Z8 148 aa24.69■■□□□ 1.54
BEST1-207ENST00000533521 TBC1D13Q9NVG8 400 aa24.69■■□□□ 1.54
BEST1-207ENST00000533521 BCAR1P56945 870 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 ERVFC1P60507 584 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 PPP2R5AQ15172 486 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 KRT79Q5XKE5 535 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 LARP1BQ659C4 914 aaKnown RBP24.68■■□□□ 1.54
BEST1-207ENST00000533521 URGCPQ8TCY9 931 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 LPPQ93052 612 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 TLE6Q9H808 572 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 RSAD1Q9HA92 442 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 PRMT7Q9NVM4 692 aaPredicted RBP24.68■■□□□ 1.54
BEST1-207ENST00000533521 PRKAG3Q9UGI9 489 aa24.68■■□□□ 1.54
BEST1-207ENST00000533521 A0A087WWV3 80 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 A0A1B0GUA9 196 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 ARF4P18085 180 aaPredicted RBP24.67■■□□□ 1.54
BEST1-207ENST00000533521 NAMPTP43490 491 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 ECM1Q16610 540 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 BRAPQ7Z569 592 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 ADGRD2Q7Z7M1 963 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 ZBTB8OSQ8IWT0 167 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 FAM178BQ8IXR5 827 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 HACE1Q8IYU2 909 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 SMG8Q8ND04 991 aaKnown RBP24.67■■□□□ 1.54
BEST1-207ENST00000533521 MICAL1Q8TDZ2 1067 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 SNX29Q8TEQ0 813 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 KIFAP3Q92845 792 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 FZD8Q9H461 694 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 NRDE2Q9H7Z3 1164 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 GPRC5CQ9NQ84 441 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 KIAA1024Q9UPX6 916 aa24.67■■□□□ 1.54
BEST1-207ENST00000533521 MEIS3P2A8K0S8 358 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 H3BQ06 376 aaPredicted RBP24.66■■□□□ 1.54
BEST1-207ENST00000533521 SLC26A4O43511 780 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 EYA4O95677 639 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 BMP15O95972 392 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 PDCP20941 246 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 BMS1Q14692 1282 aaKnown RBP24.66■■□□□ 1.54
BEST1-207ENST00000533521 IL17AQ16552 155 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 DUSP6Q16828 381 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 HYIQ5T013 277 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 TMEM184AQ6ZMB5 413 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 MSLNLQ96KJ4 702 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 DDX19AQ9NUU7 478 aaKnown RBP24.66■■□□□ 1.54
BEST1-207ENST00000533521 DNM3Q9UQ16 869 aa24.66■■□□□ 1.54
BEST1-207ENST00000533521 LRRIQ4A6NIV6 560 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 TBX10O75333 385 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 GALTP07902 379 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 ITGA4P13612 1032 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 GTF2F1P35269 517 aaKnown RBP eCLIP24.65■■□□□ 1.54
BEST1-207ENST00000533521 NRIP1P48552 1158 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 RNASELQ05823 741 aaKnown RBP24.65■■□□□ 1.54
BEST1-207ENST00000533521 COASYQ13057 564 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 SLC27A1Q6PCB7 646 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 TMEM169Q96HH4 297 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 NECAB3Q96P71 396 aaPredicted RBP24.65■■□□□ 1.54
BEST1-207ENST00000533521 TMEM175Q9BSA9 504 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 BHMT2Q9H2M3 363 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 IGFLR1Q9H665 355 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 GIT1Q9Y2X7 761 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 IPPQ9Y573 584 aa24.65■■□□□ 1.54
BEST1-207ENST00000533521 EFNA5P52803 228 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 DLX2Q07687 328 aaPredicted RBP24.64■■□□□ 1.54
BEST1-207ENST00000533521 SMAD4Q13485 552 aaKnown RBP24.64■■□□□ 1.54
BEST1-207ENST00000533521 KCNC3Q14003 757 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 GIT2Q14161 759 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 DDX53Q86TM3 631 aaKnown RBP24.64■■□□□ 1.54
BEST1-207ENST00000533521 INTS4Q96HW7 963 aaKnown RBP24.64■■□□□ 1.54
BEST1-207ENST00000533521 IGSF21Q96ID5 467 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 AK8Q96MA6 479 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 TCF25Q9BQ70 676 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 MMTAG2Q9BU76 263 aaKnown RBP24.64■■□□□ 1.54
BEST1-207ENST00000533521 TIPINQ9BVW5 301 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 CD207Q9UJ71 328 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 IRAK3Q9Y616 596 aa24.64■■□□□ 1.54
BEST1-207ENST00000533521 ZC3H11AO75152 810 aaKnown RBP eCLIP24.63■■□□□ 1.53
BEST1-207ENST00000533521 NDUFV1P49821 464 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 SMC1AQ14683 1233 aaKnown RBP24.63■■□□□ 1.53
BEST1-207ENST00000533521 SMAD2Q15796 467 aaKnown RBP24.63■■□□□ 1.53
BEST1-207ENST00000533521 MAPK6Q16659 721 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 EP400NLQ6ZTU2 488 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 MAEAQ7L5Y9 396 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 TMC7Q7Z402 723 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 MRPL43Q8N983 215 aaKnown RBP24.63■■□□□ 1.53
BEST1-207ENST00000533521 IFT74Q96LB3 600 aa24.63■■□□□ 1.53
BEST1-207ENST00000533521 EIF2AQ9BY44 585 aaKnown RBP24.63■■□□□ 1.53
BEST1-207ENST00000533521 TRIM6Q9C030 488 aaPredicted RBP24.63■■□□□ 1.53
BEST1-207ENST00000533521 NT5C3AQ9H0P0 336 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms