RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 COG1Q8WTW3 980 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 KLC2Q9H0B6 622 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 CNOT7Q9UIV1 285 aaKnown RBP18.74■□□□□ 0.59
PHRF1-205ENST00000533464 CASQ2O14958 399 aaPredicted RBP18.74■□□□□ 0.59
PHRF1-205ENST00000533464 FMO5P49326 533 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 STAT5BP51692 787 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 DUOXA2Q1HG44 320 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 CCDC137Q6PK04 289 aaKnown RBP18.74■□□□□ 0.59
PHRF1-205ENST00000533464 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
PHRF1-205ENST00000533464 RNPC3Q96LT9 517 aaKnown RBP18.74■□□□□ 0.59
PHRF1-205ENST00000533464 STK33Q9BYT3 514 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 SLITRK6Q9H5Y7 841 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
PHRF1-205ENST00000533464 GOLGA8MH3BSY2 632 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 M0QYV0 167 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RSBN1LQ6PCB5 846 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RNF149Q8NC42 400 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RNF181Q9P0P0 153 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 APEX2Q9UBZ4 518 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RASA4BC9J798 803 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RASA4O43374 803 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 DGAT1O75907 488 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RPA1P27694 616 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 THOC5Q13769 683 aaKnown RBP18.73■□□□□ 0.59
PHRF1-205ENST00000533464 PLCB4Q15147 1175 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 ZC2HC1CQ53FD0 456 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-205ENST00000533464 RHOT1Q8IXI2 618 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 SERPINB6P35237 376 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 MMP19Q99542 508 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 HUS1O60921 280 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 SLC4A1P02730 911 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 NR3C2P08235 984 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 SLC9A1P19634 815 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 MAP7Q14244 749 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 HIBCHQ6NVY1 386 aaPredicted RBP18.73■□□□□ 0.59
PHRF1-205ENST00000533464 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 DEPDC1BQ8WUY9 529 aa18.73■□□□□ 0.59
PHRF1-205ENST00000533464 SCAF8Q9UPN6 1271 aaKnown RBP18.73■□□□□ 0.59
PHRF1-205ENST00000533464 SSTR3P32745 418 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 TOB1P50616 345 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 SRRM1Q8IYB3 904 aaKnown RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 MORC4Q8TE76 937 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 IP6K2Q9UHH9 426 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 SDC4P31431 198 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 GALCP54803 685 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 CASP7P55210 303 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 RBBP5Q15291 538 aaKnown RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 DBN1Q16643 649 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 XKR3Q5GH77 459 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 SKA2Q8WVK7 121 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 C1orf54Q8WWF1 131 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 KRT37O76014 449 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 KLK7P49862 253 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 SLC10A5Q5PT55 438 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 MS4A14Q96JA4 679 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 FHOD1Q9Y613 1164 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 MORC2Q9Y6X9 1032 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 TARSL2A2RTX5 802 aaKnown RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 FAM187AA6NFU0 413 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 CAV1Q03135 178 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 PITPNM3Q9BZ71 974 aa18.72■□□□□ 0.59
PHRF1-205ENST00000533464 FNDC3AQ9Y2H6 1198 aaKnown RBP18.72■□□□□ 0.59
PHRF1-205ENST00000533464 ATP8B3O60423 1300 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 SCP2P22307 547 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 SEPT6Q14141 434 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 E2F5Q15329 346 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 TMEM143Q96AN5 459 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 NCAPGQ9BPX3 1015 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 TMEM39BQ9GZU3 492 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 PSMD14O00487 310 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 MYBL1P10243 752 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 RWDD4Q6NW29 188 aaKnown RBP18.71■□□□□ 0.59
PHRF1-205ENST00000533464 TIPINQ9BVW5 301 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 TYW5A2RUC4 315 aaKnown RBP18.71■□□□□ 0.59
PHRF1-205ENST00000533464 ACOT2P49753 483 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 PDCD7Q8N8D1 485 aaKnown RBP18.71■□□□□ 0.59
PHRF1-205ENST00000533464 KRT7P08729 469 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 CIITAP33076 1130 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 EFNA5P52803 228 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 SPOPLQ6IQ16 392 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 ADGRA1Q86SQ6 560 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 DAGLBQ8NCG7 672 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 THOC1Q96FV9 657 aaKnown RBP18.71■□□□□ 0.59
PHRF1-205ENST00000533464 LCMT1Q9UIC8 334 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 HPSEQ9Y251 543 aa18.71■□□□□ 0.59
PHRF1-205ENST00000533464 PXDNQ92626 1479 aa18.71■□□□□ 0.58
PHRF1-205ENST00000533464 SLC37A4O43826 429 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 RTN2O75298 545 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 SPARCL1Q14515 664 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 SEC23AQ15436 765 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 HDLBPQ00341 1268 aaKnown RBP18.7■□□□□ 0.58
PHRF1-205ENST00000533464 ZNF280CQ8ND82 737 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 KCND2Q9NZV8 630 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms