RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 F5H6K3 240 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 C21orf2O43822 256 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 MGRN1O60291 552 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 PSMD10O75832 226 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 MTA2O94776 668 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 RPL21P46778 160 aaKnown RBP17.93■□□□□ 0.46
CTSB-228ENST00000533455 CYP2J2P51589 502 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 BFSP1Q12934 665 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 NEDD9Q14511 834 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 CYP1B1Q16678 543 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 TATDN1Q6P1N9 297 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 ANKS4BQ8N8V4 417 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 MORC4Q8TE76 937 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 RUNDC3BQ96NL0 473 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 SEPT11Q9NVA2 429 aaKnown RBP17.93■□□□□ 0.46
CTSB-228ENST00000533455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.93■□□□□ 0.46
CTSB-228ENST00000533455 FOXN3O00409 490 aaPredicted RBP17.93■□□□□ 0.46
CTSB-228ENST00000533455 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 ARHGAP44Q17R89 818 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 TMEM179Q6ZVK1 233 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 KSR1Q8IVT5 923 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 KRT35Q92764 455 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 STRA6Q9BX79 667 aa17.93■□□□□ 0.46
CTSB-228ENST00000533455 STMN4Q9H169 189 aaPredicted RBP17.93■□□□□ 0.46
CTSB-228ENST00000533455 NDUFB10O96000 172 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 BCRP11274 1271 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 HOXA13P31271 388 aaPredicted RBP17.92■□□□□ 0.46
CTSB-228ENST00000533455 PEX5P50542 639 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 SLMAPQ14BN4 828 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 AADACL2Q6P093 401 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 TTC27Q6P3X3 843 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 TPH2Q8IWU9 490 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 GPATCH11Q8N954 259 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 SLC20A1Q8WUM9 679 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 SLC5A5Q92911 643 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 WDR18Q9BV38 432 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.92■□□□□ 0.469e-19■□□□□ 11
CTSB-228ENST00000533455 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 USP21Q9UK80 565 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 SLC12A4Q9UP95 1085 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
CTSB-228ENST00000533455 FAM196BA6NMK8 535 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 CRKP46108 304 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 PRELPP51888 382 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 GPC5P78333 572 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 NBPF9Q3BBW0 867 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 SEL1L2Q5TEA6 688 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 LRCH2Q5VUJ6 765 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 ZDHHC14Q8IZN3 488 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 ZDHHC15Q96MV8 337 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 SEMA4AQ9H3S1 761 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 INTS9Q9NV88 658 aaKnown RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 LOC102724159A0A0B4J2E5 919 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 TULP1O00294 542 aaPredicted RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 P4HA2O15460 535 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 FTLP02792 175 aaPredicted RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 RARGP13631 454 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 MARCKSL1P49006 195 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 IFI35P80217 286 aaPredicted RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 PWP2Q15269 919 aaKnown RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 MFSD5Q6N075 450 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 CYFIP1Q7L576 1253 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 LRRC34Q8IZ02 419 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 CD101Q93033 1021 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 ART4Q93070 314 aa17.91■□□□□ 0.46
CTSB-228ENST00000533455 ZC3H12CQ9C0D7 883 aaKnown RBP17.91■□□□□ 0.46
CTSB-228ENST00000533455 SMCHD1A6NHR9 2005 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 TLDC2A0PJX2 215 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
CTSB-228ENST00000533455 RIPK2O43353 540 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 ATP2C2O75185 946 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 LRRN2O75325 713 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 TAL1P17542 331 aaPredicted RBP17.9■□□□□ 0.46
CTSB-228ENST00000533455 SLC8A1P32418 973 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
CTSB-228ENST00000533455 TMEM174Q8WUU8 243 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 NACC1Q96RE7 527 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 IDI2Q9BXS1 227 aa17.9■□□□□ 0.46
CTSB-228ENST00000533455 NSRP1Q9H0G5 558 aaKnown RBP17.9■□□□□ 0.46
CTSB-228ENST00000533455 EXOC3O60645 756 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 RTN2O75298 545 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 BMP3P12645 472 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 ELF3P78545 371 aaPredicted RBP17.89■□□□□ 0.46
CTSB-228ENST00000533455 EPC2Q52LR7 807 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 ODR4Q5SWX8 454 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 C12orf50Q8NA57 414 aaPredicted RBP17.89■□□□□ 0.46
CTSB-228ENST00000533455 ROPN1BQ9BZX4 212 aaPredicted RBP17.89■□□□□ 0.46
CTSB-228ENST00000533455 TAOK3Q9H2K8 898 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 ROPN1Q9HAT0 212 aaPredicted RBP17.89■□□□□ 0.46
CTSB-228ENST00000533455 SAMD15Q9P1V8 674 aa17.89■□□□□ 0.46
CTSB-228ENST00000533455 SLX4Q8IY92 1834 aa17.89■□□□□ 0.45
CTSB-228ENST00000533455 ZBTB39O15060 712 aa17.89■□□□□ 0.45
CTSB-228ENST00000533455 COMTP21964 271 aa17.89■□□□□ 0.45
CTSB-228ENST00000533455 COILP38432 576 aaPredicted RBP17.89■□□□□ 0.45
CTSB-228ENST00000533455 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.45
CTSB-228ENST00000533455 AUHQ13825 339 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms